CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CPAG_03572
(
Candida parapsilosis
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
CPAG_03572
T184352_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FKH2
M00045_2.00
Saccharomyces cerevisiae
GTAAACAH
DTGTTTAC
PBM
Badis et al.(2008)
FKH2_4517
0.773
0.826
FKH2
M01542_2.00
Saccharomyces cerevisiae
NNVWMAAYAN
NTRTTKWBNN
PBM
Zhu et al.(2009)
Fkh2
0.773
0.826
FKH2
M07474_2.00
Saccharomyces cerevisiae
GTAAACA
TGTTTAC
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0297.1
0.773
0.826
FKH2
M08556_2.00
Saccharomyces cerevisiae
NNNNDNGTAAACAAANNNDV
BHNNNTTTGTTTACNHNNNN
Misc
DeBoer et al.(2011)
YNL068C_830
0.773
0.826
FKH1
M01541_2.00
Saccharomyces cerevisiae
NNRTMAAYAN
NTRTTKAYNN
PBM
Zhu et al.(2009)
Fkh1
0.690
0.674
FKH1
M08555_2.00
Saccharomyces cerevisiae
NNGTAAACADVN
NBHTGTTTACNN
Misc
DeBoer et al.(2011)
YIL131C_2002
0.690
0.674
Foxj2
M01980_2.00
Mus musculus
RTAAACAN
NTGTTTAY
PBM
Weirauch et al.(2014)
pTH6638
0.664
0.547
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CPAG_03572.1
Forkhead
269
358
KPPYSYATMITQAILSDPHGVMSLSDIYNWISDRYAYYRFSKTGWQNSIRHNLSLNKAFEKVPRKPNEPGKGMKWQISESYKQDFLKKLN
Links
Other
Forkhead
family TFs
Other
Candida parapsilosis
TFs
86 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy