CpipJ_CPIJ010485 (Culex pipiens)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00250 (Forkhead) IPR001766 CpipJ_CPIJ010485 T184364_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
FOXL2
M04847_2.00
Homo sapiens
NVBGHMAACAH

DTGTTKDCVBN
SELEX
Yin et al.(2017)
FOXL2_FL_HT-SELEX
0.758 0.814
Foxl2
M09112_2.00
Mus musculus
DWDWRTAAACA

TGTTTAYWHWH
Misc
Kulakovskiy et al.(2013)
FOXL2_MOUSE.H11MO.0.C
0.758 0.814
FOXL2
M10560_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXL2_Q2
0.758 0.814
FOXL2
M10561_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXL2_Q5
0.758 0.814
FOXL2
M04848_2.00
Homo sapiens
HVCGWMAACAH

DTGTTKWCGBD
SELEX
Yin et al.(2017)
FOXL2_FL_Methyl-HT-SELEX
0.758 0.814
FOXE1
M04845_2.00
Homo sapiens
BVYTAWRYAAACADN

NHTGTTTRYWTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_HT-SELEX
0.711 0.663
FOXE1
M04846_2.00
Homo sapiens
BVYTAARYAAACAWH

DWTGTTTRYTTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_Methyl-HT-SELEX
0.711 0.663
Gm5294
M01984_2.00
Mus musculus
NNKRTAAACANN

NNTGTTTAYMNN
PBM
Weirauch et al.(2014)
pTH3802
0.709 0.581
FOXD3
M03044_2.00
Homo sapiens
NRTMAAYRTTWDYN

NRHWAAYRTTKAYN
SELEX
Jolma et al.(2013)
FOXD3_1
0.699 0.674
FOXD3
M03045_2.00
Homo sapiens
RTAAAYA

TRTTTAY
SELEX
Jolma et al.(2013)
FOXD3_2
0.699 0.674
FOXD3
M04855_2.00
Homo sapiens
VHWRHRTAMACW

WGTKTAYDYWDB
SELEX
Yin et al.(2017)
FOXD3_eDBD_HT-SELEX
0.699 0.674
Foxd3
M09114_2.00
Mus musculus
DVNWRDRNAAACAVN

NBTGTTTNYHYWNBH
Misc
Kulakovskiy et al.(2013)
FOXD3_MOUSE.H11MO.0.C
0.699 0.674
FOXD3
M10565_2.00
Homo sapiens
RADHAAAYAWWH

DWWTRTTTDHTY
Transfac
Matys et al.(2006)
V$FOXD3_01
0.699 0.674
FOXD3
M10566_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HFH2_Q5
0.699 0.674
FOXD3
M04856_2.00
Homo sapiens
VYWRHRTAAACW

WGTTTAYDYWRB
SELEX
Yin et al.(2017)
FOXD3_eDBD_Methyl-HT-SELEX
0.699 0.674
Foxd1
M10570_2.00
Mus musculus
SYWAWGTAAACADHVN

NBDHTGTTTACWTWRS
Transfac
Matys et al.(2006)
V$FREAC4_01
0.698 0.686
FOXD2
M03042_2.00
Homo sapiens
NRTMAAYRTTWDYN

NRHWAAYRTTKAYN
SELEX
Jolma et al.(2013)
FOXD2_1
0.698 0.674
FOXD2
M03043_2.00
Homo sapiens
RTAAAYA

TRTTTAY
SELEX
Jolma et al.(2013)
FOXD2_2
0.698 0.674
FOXD2
M04851_2.00
Homo sapiens
HWASAATAAYAWWN

NWWTRTTATTSTWD
SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_1
0.698 0.674
FOXD2
M04852_2.00
Homo sapiens
VYWANRTAAAYAH

DTRTTTAYNTWRB
SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_2
0.698 0.674
FOXD1
M02681_2.00
Homo sapiens
GTAAACAD

HTGTTTAC
SELEX
Mathelier et al.(2014)
MA0031.1
0.698 0.674
FOXD1
M10567_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FREAC4_02
0.698 0.674
FOXD2
M04853_2.00
Homo sapiens
HWACAATAACRWWN

NWWYGTTATTGTWD
SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_1
0.698 0.674
FOXD2
M04854_2.00
Homo sapiens
RYTRNGTMAACRD

HYGTTKACNYARY
SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_2
0.698 0.674
Foxl1
M00164_2.00
Mus musculus
NNNRTMAAYA

TRTTKAYNNN
PBM
Badis et al.(2009)
Foxl1_2809
0.698 0.674
FOXL1
M03034_2.00
Homo sapiens
RTAAACA

TGTTTAY
SELEX
Jolma et al.(2013)
FOXL1_1
0.698 0.663
FOXL1
M03035_2.00
Homo sapiens
NRTAAAYAAAYAN

NTRTTTRTTTAYN
SELEX
Jolma et al.(2013)
FOXL1_2
0.698 0.663
FOXL1
M10558_2.00
Homo sapiens
DHNVHATAAAYAHNNN

NNNDTRTTTATDBNDH
Transfac
Matys et al.(2006)
V$FREAC7_01
0.698 0.663
foxe3
M01228_2.00
Xenopus tropicalis
WNNVHHMAYW

WRTKDDBNNW
PBM
Lambert et al.(2019)
pTH9824
0.698 0.674
FOXD4L4
M10564_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXD4L4_01
0.695 0.640
fd64A
M06197_2.00
Drosophila melanogaster
KVWAAACA

TGTTTWBM
B1H
Zhu et al.(2011)
fd64A_SANGER_5_FBgn0004895
0.691 0.628
fd59A
M03739_2.00
Drosophila melanogaster
HWAWRTAAACAWW

WWTGTTTAYWTWD
SELEX
Nitta et al.(2015)
fd59A_1
0.679 0.640
fd59A
M03740_2.00
Drosophila melanogaster
WWAVAATAACAHN

NDTGTTATTBTWW
SELEX
Nitta et al.(2015)
fd59A_2
0.679 0.640
fd59A
M03741_2.00
Drosophila melanogaster
YWRWRTAAAYAHH

DDTRTTTAYWYWR
SELEX
Nitta et al.(2015)
fd59A_3
0.679 0.640
fd59A
M03742_2.00
Drosophila melanogaster
MWACAAYAAYAHW

WDTRTTRTTGTWK
SELEX
Nitta et al.(2015)
fd59A_4
0.679 0.640
FOXF1
M10529_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKHL5_Q3
0.677 0.640
FOXF1
M10530_2.00
Homo sapiens
YRHATAAACAHNB

VNDTGTTTATDYR
Transfac
Matys et al.(2006)
V$HFH8_01
0.677 0.640
let-381
M00664_2.00
Caenorhabditis elegans
RTAAACAW

WTGTTTAY
PBM
Narasimhan et al.(2015)
pTH9057
0.669 0.570
FOXF2
M02680_2.00
Homo sapiens
BNHNSRTAAACAHN

NDTGTTTAYSNDNV
SELEX
Mathelier et al.(2014)
MA0030.1
0.669 0.628
FOXF2
M10548_2.00
Homo sapiens
BNHNBRTAAACAHNVN

NBNDTGTTTAYVNDNV
Transfac
Matys et al.(2006)
V$FREAC2_01
0.669 0.628
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CpipJ_CPIJ010485-RA Forkhead 146 235

Links

Other Forkhead family TFs
Other Culex pipiens TFs

757 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ENSAMEG00000017369 Ailuropoda melanoleuca ENSAMEG00000017369 I 0.000
ENSP00000384273-D1 Bos grunniens ENSP00000384273-D1 I 0.000
RELA Bos taurus ENSBTAG00000013895 I 0.000
RELA Callithrix jacchus ENSCJAG00000002037 I 0.000
RELA Canis familiaris ENSCAFG00000013334 I 0.000
RELA Cavia porcellus ENSCPOG00000020593 I 0.000
Cmyd_10013204 Chelonia mydas Cmyd_10013204 I 0.000
ENSCSAG00000007981 Chlorocebus sabaeus ENSCSAG00000007981 I 0.000
RELA Dasypus novemcinctus ENSDNOG00000039743 I 0.000
RELA Equus caballus ENSECAG00000013763 I 0.000
RELA Felis catus ENSFCAG00000005696 I 0.000
RELA Gorilla gorilla ENSGGOG00000011810 I 0.000
RELA Homo sapiens ENSG00000173039 D 0.000
ENSSTOG00000027336 Ictidomys tridecemlineatus ENSSTOG00000027336 I 0.000
RELA Loxodonta africana ENSLAFG00000021967 I 0.000
ENSP00000384273 Macaca fascicularis ENSP00000384273 I 0.000
RELA Macaca mulatta ENSMMUG00000007418 I 0.000
RELA Microcebus murinus ENSMICG00000008872 I 0.000
RELA Monodelphis domestica ENSMODG00000009603 I 0.000
ENSMPUG00000011637 Mustela putorius furo ENSMPUG00000011637 I 0.000
Rela Mus musculus ENSMUSG00000024927 D 0.000
Myotis_brandtii_Rela_10030730 Myotis brandtii Myotis_brandtii_Rela_10030730 I 0.000
RELA Myotis lucifugus ENSMLUG00000008727 I 0.000
ENSNLEG00000005769 Nomascus leucogenys ENSNLEG00000005769 I 0.000
ENSOPRG00000010827 Ochotona princeps ENSOPRG00000010827 I 0.000
Ogr00666 Ophisaurus gracilis Ogr00666 I 0.000
RELA Otolemur garnettii ENSOGAG00000014117 I 0.000
ENSOARG00000017426 Ovis aries ENSOARG00000017426 I 0.000
ENSPANG00000013650 Papio anubis ENSPANG00000013650 I 0.000
ENSPSIG00000002944 Pelodiscus sinensis ENSPSIG00000002944 I 0.000
Pvit_10466 Pogona vitticeps Pvit_10466 I 0.000
ENSPPYG00000003053 Pongo abelii ENSPPYG00000003053 I 0.000
RELA Pteropus vampyrus ENSPVAG00000009983 I 0.000
Rela Rattus norvegicus ENSRNOG00000030888 I 0.000
RELA Sorex araneus ENSSARG00000003535 I 0.000
RELA Sus scrofa ENSSSCG00000012981 I 0.000
RELA Tursiops truncatus ENSTTRG00000002311 I 0.000
rela.L Xenopus laevis XB-GENE-946512 I 0.000
rela Xenopus tropicalis XB-GENE-946506 I 0.000