CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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RO3G_13872
(
Rhizopus oryzae
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
RO3G_13872
T184399_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxp2
M00792_2.00
Mus musculus
RTAAACAD
HTGTTTAY
PBM
Weirauch et al.(2013)
pTH1288
0.685
0.442
FOXP2
M05866_2.00
Homo sapiens
RTAAAYAWNN
NNWTRTTTAY
SMiLE-seq
Isakova et al.(2017)
FOXP2
0.685
0.442
FOXP2
M08116_2.00
Homo sapiens
NDGTAAACAVN
NBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0593.1
0.685
0.442
FOXP2
M09089_2.00
Homo sapiens
DGTAAACAV
BTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C
0.685
0.442
Foxp2
M09101_2.00
Mus musculus
NGTAAACAN
NTGTTTACN
Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A
0.685
0.442
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
RO3T_13871
Forkhead
80
171
KPPYSYATLIAQAILCSKDGQLTLNDIYIWISTHYPAYRLGERGWKNSVRHNLSLNKKWFQKRDRRPTEANPGKGSYWTLVPGAEQVFIDSL
Links
Other
Forkhead
family TFs
Other
Rhizopus oryzae
TFs
118 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy