ACYPI001196 (Acyrthosiphon pisum)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 ACYPI001196 T184503_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
fd96Ca
M03743_2.00
Drosophila melanogaster
WRWGYMAATATTKRCWYW

WRWGYMAATATTKRCWYW
SELEX
Nitta et al.(2015)
fd96Ca_1
0.906 0.907
Foxb1
M01983_2.00
Mus musculus
TRTTKAYWYW

WRWRTMAAYA
PBM
Weirauch et al.(2014)
pTH2808
0.906 0.849
FOXB1
M03028_2.00
Homo sapiens
GAATGACACRGCKV

BMGCYGTGTCATTC
SELEX
Jolma et al.(2013)
FOXB1_1
0.906 0.849
FOXB1
M03029_2.00
Homo sapiens
WRWGTMAATATTKACWYW

WRWGTMAATATTKACWYW
SELEX
Jolma et al.(2013)
FOXB1_2
0.906 0.849
FOXB1
M03030_2.00
Homo sapiens
WTRTTKACWTW

WAWGTMAAYAW
SELEX
Jolma et al.(2013)
FOXB1_3
0.906 0.849
FOXB1
M03031_2.00
Homo sapiens
NTRTTTACW

WGTAAAYAN
SELEX
Jolma et al.(2013)
FOXB1_4
0.906 0.849
FOXB1
M04837_2.00
Homo sapiens
NWRDGYMAATATTKRCWYWD

HWRWGYMAATATTKRCHYWN
SELEX
Yin et al.(2017)
FOXB1_eDBD_HT-SELEX
0.906 0.849
FOXB1
M04838_2.00
Homo sapiens
NWRNGYMAATATTKRCDYWD

HWRHGYMAATATTKRCNYWN
SELEX
Yin et al.(2017)
FOXB1_eDBD_Methyl-HT-SELEX
0.906 0.849
lin-31
M00665_2.00
Caenorhabditis elegans
NWRTAAAYANN

NNTRTTTAYWN
PBM
Narasimhan et al.(2015)
pTH9116
0.798 0.756
fkh
M03734_2.00
Drosophila melanogaster
WRWGYMAATATTKRCWYW

WRWGYMAATATTKRCWYW
SELEX
Nitta et al.(2015)
fkh_1
0.706 0.698
fkh
M03735_2.00
Drosophila melanogaster
HWASAATAAYAWT

AATRTTATTSTWD
SELEX
Nitta et al.(2015)
fkh_2
0.706 0.698
fkh
M06473_2.00
Drosophila melanogaster
NTRDDYAAACA

TGTTTRHHYAN
B1H
Mathelier et al.(2014)
MA0446.1
0.706 0.698
fkh
M06194_2.00
Drosophila melanogaster
NTRDDYAAACA

TGTTTRHHYAN
B1H
Zhu et al.(2011)
fkh_NAR_FBgn0000659
0.706 0.698
fkh
M08200_2.00
Drosophila melanogaster
NTRDDYAAACA

TGTTTRHHYAN
ChIP-seq
Contrino et al.(2012)
Mf15
0.706 0.698
fkh
M09668_2.00
Drosophila melanogaster
TRTTTRCAHAAG

CTTDTGYAAAYA
Misc
Kulakovskiy et al.(2009)
fkh
0.706 0.698
Foxa2
M00162_2.00
Mus musculus
GTAAAYAW

WTRTTTAC
PBM
Badis et al.(2009)
Foxa2_2830
0.697 0.686
FOXA2
M04815_2.00
Homo sapiens
NHVNRYMAATATTKACNNDN

NHNNGTMAATATTKRYNBDN
SELEX
Yin et al.(2017)
FOXA2_eDBD_HT-SELEX
0.697 0.686
Foxa2
M08121_2.00
Mus musculus
TRTTTACWYWDN

NHWRWGTAAAYA
ChIP-seq
Mathelier et al.(2014)
MA0047.2
0.697 0.686
FOXA2
M07959_2.00
Homo sapiens
NNWRWGYAAAYANNN

NNNTRTTTRCWYWNN
ChIP-seq
Gerstein et al.(2012)
HepG2_FOXA2_HudsonAlpha
0.697 0.686
FOXA2
M09088_2.00
Homo sapiens
NHWRWGTAAACA

TGTTTACWYWDN
Misc
Kulakovskiy et al.(2013)
FOXA2_HUMAN.H11MO.0.A
0.697 0.686
Foxa2
M09104_2.00
Mus musculus
BNHTRTTKACWYW

WRWGTMAAYADNV
Misc
Kulakovskiy et al.(2013)
FOXA2_MOUSE.H11MO.0.A
0.697 0.686
FOXA2
M09542_2.00
Homo sapiens
WVWGTMAACANV

BNTGTTKACWBW
Misc
Heinz et al.(2010)
Liver-Foxa2_GSE25694
0.697 0.686
FOXA2
M10540_2.00
Homo sapiens
WAARYAAAYADKNMV

BKNMHTRTTTRYTTW
Transfac
Matys et al.(2006)
V$HNF3B_01
0.697 0.686
FOXA2
M10541_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF3B_Q6
0.697 0.686
AAA20679
M10575_2.00
Xenopus laevis
WNWGTMAACAWWMW

WKWWTGTTKACWNW
Transfac
Matys et al.(2006)
V$XFD3_01
0.697 0.686
FOXA2
M04816_2.00
Homo sapiens
NWRNRYMAATATTKACWNWN

NWNWGTMAATATTKRYNYWN
SELEX
Yin et al.(2017)
FOXA2_eDBD_Methyl-HT-SELEX
0.697 0.686
Q2L6N7_PELSI
M01990_2.00
Trionyx sinensis
KTRTTTACA

TGTAAAYAM
PBM
Weirauch et al.(2014)
pTH5334
0.682 0.663
FOXA1
M04817_2.00
Homo sapiens
NTRTKTACMYWN

NWRKGTAMAYAN
SELEX
Yin et al.(2017)
FOXA1_eDBD_HT-SELEX
0.680 0.698
FOXA1
M04819_2.00
Homo sapiens
BVYTAWGTAAACAAWN

NWTTGTTTACWTARBV
SELEX
Yin et al.(2017)
FOXA1_FL_HT-SELEX_1
0.680 0.698
FOXA1
M04820_2.00
Homo sapiens
HWRWRYAAATATTKACWYWR

YWRWGTMAATATTTRYWYWD
SELEX
Yin et al.(2017)
FOXA1_FL_HT-SELEX_2
0.680 0.698
FOXA1
M08117_2.00
Homo sapiens
NNNNTRTTTACWYWD

HWRWGTAAAYANNNN
ChIP-seq
Mathelier et al.(2014)
MA0148.3
0.680 0.698
FOXA1
M07960_2.00
Homo sapiens
NNYWRWGYAAACANN

NNTGTTTRCWYWRNN
ChIP-seq
Gerstein et al.(2012)
ECC-1_FOXA1_HudsonAlpha
0.680 0.698
FOXA1
M07961_2.00
Homo sapiens
HWRWGTAAAYA

TRTTTACWYWD
ChIP-seq
Gerstein et al.(2012)
HepG2_FOXA1_HudsonAlpha
0.680 0.698
FOXA1
M07962_2.00
Homo sapiens
NWVWGTAAACA

TGTTTACWBWN
ChIP-seq
Gerstein et al.(2012)
T-47D_FOXA1_HudsonAlpha
0.680 0.698
FOXA1
M08199_2.00
Homo sapiens
BWRDGTAAACANN

NNTGTTTACHYWV
ChIP-seq
Contrino et al.(2012)
Mv69
0.680 0.698
FOXA1
M08028_2.00
Homo sapiens
WRWRYAAAYA

TRTTTRYWYW
ChIP-seq
Chen et al.(2011)
GSE15244_FoxA1
0.680 0.698
FOXA1
M09090_2.00
Homo sapiens
VHWRWGTAAACA

TGTTTACWYWDB
Misc
Kulakovskiy et al.(2013)
FOXA1_HUMAN.H11MO.0.A
0.680 0.698
Foxa1
M09103_2.00
Mus musculus
TRTTKACWYW

WRWGTMAAYA
Misc
Kulakovskiy et al.(2013)
FOXA1_MOUSE.H11MO.0.A
0.680 0.698
FOXA1
M09544_2.00
Homo sapiens
WGCCAARRYAAAYANN

NNTRTTTRYYTTGGCW
Misc
Heinz et al.(2010)
LNCAP-FOXA1_GSE27824_2
0.680 0.698
FOXA1
M09543_2.00
Homo sapiens
WRWGTAAACA

TGTTTACWYW
Misc
Heinz et al.(2010)
LNCAP-FOXA1_GSE27824_1
0.680 0.698
FOXA1
M09545_2.00
Homo sapiens
WRWGTAAAYA

TRTTTACWYW
Misc
Heinz et al.(2010)
MCF7-FOXA1_GSE26831
0.680 0.698
FOXA1
M10542_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXA1_02
0.680 0.698
FOXA1
M10543_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXA1_03
0.680 0.698
FOXA1
M10544_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF3A_01
0.680 0.698
FOXA1
M10545_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF3ALPHA_Q6
0.680 0.698
FOXA1
M10546_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF3A_Q6
0.680 0.698
FOXA1
M04818_2.00
Homo sapiens
NWRDGYMAAYAW

WTRTTKRCHYWN
SELEX
Yin et al.(2017)
FOXA1_eDBD_Methyl-HT-SELEX
0.680 0.698
FOXA1
M04821_2.00
Homo sapiens
BVYTAWGTAAACAAWV

BWTTGTTTACWTARBV
SELEX
Yin et al.(2017)
FOXA1_FL_Methyl-HT-SELEX_1
0.680 0.698
FOXA1
M04822_2.00
Homo sapiens
YTRWRYAAATATTTACWYAR

YTRWGTAAATATTTRYWYAR
SELEX
Yin et al.(2017)
FOXA1_FL_Methyl-HT-SELEX_2
0.680 0.698
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ACYPI001196-PA Forkhead 13 102

Links

Other Forkhead family TFs
Other Acyrthosiphon pisum TFs

466 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action