CRE02153 (Caenorhabditis remanei)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 CRE02153 T184945_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
fd59A
M03739_2.00
Drosophila melanogaster
HWAWRTAAACAWW

WWTGTTTAYWTWD
SELEX
Nitta et al.(2015)
fd59A_1
0.730 0.802
fd59A
M03740_2.00
Drosophila melanogaster
WWAVAATAACAHN

NDTGTTATTBTWW
SELEX
Nitta et al.(2015)
fd59A_2
0.730 0.802
fd59A
M03741_2.00
Drosophila melanogaster
YWRWRTAAAYAHH

DDTRTTTAYWYWR
SELEX
Nitta et al.(2015)
fd59A_3
0.730 0.802
fd59A
M03742_2.00
Drosophila melanogaster
MWACAAYAAYAHW

WDTRTTRTTGTWK
SELEX
Nitta et al.(2015)
fd59A_4
0.730 0.802
FOXD3
M03044_2.00
Homo sapiens
NRTMAAYRTTWDYN

NRHWAAYRTTKAYN
SELEX
Jolma et al.(2013)
FOXD3_1
0.722 0.837
FOXD3
M03045_2.00
Homo sapiens
RTAAAYA

TRTTTAY
SELEX
Jolma et al.(2013)
FOXD3_2
0.722 0.837
FOXD3
M04855_2.00
Homo sapiens
VHWRHRTAMACW

WGTKTAYDYWDB
SELEX
Yin et al.(2017)
FOXD3_eDBD_HT-SELEX
0.722 0.837
Foxd3
M09114_2.00
Mus musculus
DVNWRDRNAAACAVN

NBTGTTTNYHYWNBH
Misc
Kulakovskiy et al.(2013)
FOXD3_MOUSE.H11MO.0.C
0.722 0.837
FOXD3
M10565_2.00
Homo sapiens
RADHAAAYAWWH

DWWTRTTTDHTY
Transfac
Matys et al.(2006)
V$FOXD3_01
0.722 0.837
FOXD3
M10566_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HFH2_Q5
0.722 0.837
FOXD3
M04856_2.00
Homo sapiens
VYWRHRTAAACW

WGTTTAYDYWRB
SELEX
Yin et al.(2017)
FOXD3_eDBD_Methyl-HT-SELEX
0.722 0.837
foxe3
M01228_2.00
Xenopus tropicalis
WNNVHHMAYW

WRTKDDBNNW
PBM
Lambert et al.(2019)
pTH9824
0.703 0.721
FOXD4L4
M10564_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXD4L4_01
0.701 0.756
Gm5294
M01984_2.00
Mus musculus
NNKRTAAACANN

NNTGTTTAYMNN
PBM
Weirauch et al.(2014)
pTH3802
0.700 0.605
FOXD2
M03042_2.00
Homo sapiens
NRTMAAYRTTWDYN

NRHWAAYRTTKAYN
SELEX
Jolma et al.(2013)
FOXD2_1
0.698 0.814
FOXD2
M03043_2.00
Homo sapiens
RTAAAYA

TRTTTAY
SELEX
Jolma et al.(2013)
FOXD2_2
0.698 0.814
FOXD2
M04851_2.00
Homo sapiens
HWASAATAAYAWWN

NWWTRTTATTSTWD
SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_1
0.698 0.814
FOXD2
M04852_2.00
Homo sapiens
VYWANRTAAAYAH

DTRTTTAYNTWRB
SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_2
0.698 0.814
FOXD1
M02681_2.00
Homo sapiens
GTAAACAD

HTGTTTAC
SELEX
Mathelier et al.(2014)
MA0031.1
0.698 0.814
Foxd1
M10570_2.00
Mus musculus
SYWAWGTAAACADHVN

NBDHTGTTTACWTWRS
Transfac
Matys et al.(2006)
V$FREAC4_01
0.698 0.814
FOXD1
M10567_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FREAC4_02
0.698 0.814
FOXD2
M04853_2.00
Homo sapiens
HWACAATAACRWWN

NWWYGTTATTGTWD
SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_1
0.698 0.814
FOXD2
M04854_2.00
Homo sapiens
RYTRNGTMAACRD

HYGTTKACNYARY
SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_2
0.698 0.814
FOXE1
M04845_2.00
Homo sapiens
BVYTAWRYAAACADN

NHTGTTTRYWTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_HT-SELEX
0.684 0.651
FOXE1
M04846_2.00
Homo sapiens
BVYTAARYAAACAWH

DWTGTTTRYTTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_Methyl-HT-SELEX
0.684 0.651
fd64A
M06197_2.00
Drosophila melanogaster
KVWAAACA

TGTTTWBM
B1H
Zhu et al.(2011)
fd64A_SANGER_5_FBgn0004895
0.679 0.616
FOXL1
M03034_2.00
Homo sapiens
RTAAACA

TGTTTAY
SELEX
Jolma et al.(2013)
FOXL1_1
0.678 0.651
FOXL1
M03035_2.00
Homo sapiens
NRTAAAYAAAYAN

NTRTTTRTTTAYN
SELEX
Jolma et al.(2013)
FOXL1_2
0.678 0.651
FOXL1
M10558_2.00
Homo sapiens
DHNVHATAAAYAHNNN

NNNDTRTTTATDBNDH
Transfac
Matys et al.(2006)
V$FREAC7_01
0.678 0.651
Foxl1
M00164_2.00
Mus musculus
NNNRTMAAYA

TRTTKAYNNN
PBM
Badis et al.(2009)
Foxl1_2809
0.678 0.640
FOXF2
M02680_2.00
Homo sapiens
BNHNSRTAAACAHN

NDTGTTTAYSNDNV
SELEX
Mathelier et al.(2014)
MA0030.1
0.671 0.593
FOXF2
M10548_2.00
Homo sapiens
BNHNBRTAAACAHNVN

NBNDTGTTTAYVNDNV
Transfac
Matys et al.(2006)
V$FREAC2_01
0.671 0.593
FOXC1
M00257_2.00
Homo sapiens
NNNVHHAAYA

TRTTDDBNNN
PBM
Barrera et al.(2016)
FOXC1_REF
0.670 0.628
Foxc1
M01982_2.00
Mus musculus
HNNRHMAAYA

TRTTKDYNND
PBM
Weirauch et al.(2014)
pTH2673
0.670 0.628
FOXC1
M03013_2.00
Homo sapiens
AWRTAAAYAAAYA

TRTTTRTTTAYWT
SELEX
Jolma et al.(2013)
FOXC1_1
0.670 0.628
FOXC1
M03014_2.00
Homo sapiens
NRWMAATATTKWYN

NRWMAATATTKWYN
SELEX
Jolma et al.(2013)
FOXC1_2
0.670 0.628
FOXC1
M03015_2.00
Homo sapiens
WRWRTMAAYAW

WTRTTKAYWYW
SELEX
Jolma et al.(2013)
FOXC1_3
0.670 0.628
Foxc1
M03059_2.00
Mus musculus
RTAAAYAAACA

TGTTTRTTTAY
SELEX
Jolma et al.(2013)
Foxc1_1
0.670 0.628
Foxc1
M03060_2.00
Mus musculus
RTAAACA

TGTTTAY
SELEX
Jolma et al.(2013)
Foxc1_2
0.670 0.628
FOXC1
M09083_2.00
Homo sapiens
SBWAWRTAAACADHN

NDHTGTTTAYWTWVS
Misc
Kulakovskiy et al.(2013)
FOXC1_HUMAN.H11MO.0.C
0.670 0.628
Foxc1
M09111_2.00
Mus musculus
SBWAWRTAAACADHN

NDHTGTTTAYWTWVS
Misc
Kulakovskiy et al.(2013)
FOXC1_MOUSE.H11MO.0.C
0.670 0.628
FOXC1
M10525_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXC1_Q4
0.670 0.628
FOXC1
M10526_2.00
Homo sapiens
TSTTTATTTACDBNVN

NBNVHGTAAATAAASA
Transfac
Matys et al.(2006)
V$FREAC3_01
0.670 0.628
FOXC1
M00253_2.00
Homo sapiens
NNHATAAWHAN

NTDWTTATDNN
PBM
Barrera et al.(2016)
FOXC1_F112S
0.670 0.616
FOXC1
M00255_2.00
Homo sapiens
NRTATATWHNNN

NNNDWATATAYN
PBM
Barrera et al.(2016)
FOXC1_L130F
0.670 0.616
FOXC1
M00256_2.00
Homo sapiens
NNNNWWTYAMAWN

NWTKTRAWWNNNN
PBM
Barrera et al.(2016)
FOXC1_P79L
0.670 0.616
FOXC1
M00258_2.00
Homo sapiens
NNNAMAAYANN

NNTRTTKTNNN
PBM
Barrera et al.(2016)
FOXC1_S131L
0.670 0.616
FOXC1
M00259_2.00
Homo sapiens
RTAAACAW

WTGTTTAY
PBM
Barrera et al.(2016)
FOXC1_S82T
0.670 0.616
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CRE02153 Forkhead 133 222

Links

Other Forkhead family TFs
Other Caenorhabditis remanei TFs

Invalid Input OrderBy

707 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action