CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CRE31246
(
Caenorhabditis remanei
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
CRE31246
T184969_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
pha-4
M08123_2.00
Caenorhabditis elegans
WRWGYAAAYA
TRTTTRCWYW
ChIP-seq
Mathelier et al.(2014)
MA0546.1
0.670
0.791
pha-4
M08201_2.00
Caenorhabditis elegans
GTAAACAR
YTGTTTAC
ChIP-seq
Contrino et al.(2012)
Mw164
0.670
0.791
pha-4
M09548_2.00
Caenorhabditis elegans
RYAMAYAN
NTRTKTRY
Misc
Heinz et al.(2010)
cElegans-Embryos-PHA4_modEncode
0.670
0.791
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CRE31246
Forkhead
254
343
KPPFSYISLITMAIQKSADRQLTLAEIYNWIMMLFPFYLNNQQRWKNSVRHCLSYNDCFVKVDRSLWKPSKGCYWTLHENCGNMFEKGGY
Links
Other
Forkhead
family TFs
Other
Caenorhabditis remanei
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CRE31245
Caenorhabditis remanei
CRE31245
I
0.903
scaffold640-EXSNAP2012.6
Pristionchus exspectatus
scaffold640-EXSNAP2012.6
I
0.698
CRE21246
Caenorhabditis remanei
CRE21246
I
0.687
PPA14054
Pristionchus pacificus
PPA14054
I
0.681
DICVIV_05656
Dictyocaulus viviparus
DICVIV_05656
I
0.677
HCOI00059300
Haemonchus contortus
HCOI00059300
I
0.677
ANCDUO_11819
Ancylostoma duodenale
ANCDUO_11819
I
0.677
NBR_0000286701
Nippostrongylus brasiliensis
NBR_0000286701
I
0.677
ANCCEY_13912
Ancylostoma ceylanicum
ANCCEY_13912
I
0.677
HPLM_0000886501
Haemonchus placei
HPLM_0000886501
I
0.677
ANCCAN_19316
Ancylostoma caninum
ANCCAN_19316
I
0.677
ANCCEY_10503
Ancylostoma ceylanicum
ANCCEY_10503
I
0.677
ACAC_0000125401
Angiostrongylus cantonensis
ACAC_0000125401
I
0.677
L596_g12824
Steinernema carpocapsae
L596_g12824
I
0.675
CJA10331
Caenorhabditis japonica
CJA10331
I
0.673
SNAPOd2T00010669001
Oikopleura dioica
SNAPOd2T00010669001
I
0.672
CBG05577
Caenorhabditis briggsae
CBG05577
I
0.672
L898_g6376
Steinernema monticolum
L898_g6376
I
0.671
pha-4
Caenorhabditis elegans
WBGene00004013
D
0.670
HelroG93421
Helobdella robusta
HelroG93421
I
0.667