foxn3 (Danio rerio)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 ENSDARG00000012833 T185503_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
FOXN3
M01227_2.00
Homo sapiens
GTAAACAA

TTGTTTAC
PBM
Lambert et al.(2019)
pTH11266
0.865 0.965
NEMVEDRAFT_v1g67209
M01016_2.00
Nematostella vectensis
NNDWHRMNNN

NNNKYDWHNN
PBM
Nakagawa et al.(2013)
FoxN2-3_Nvec
0.795 0.767
FOXN2
M01007_2.00
Homo sapiens
NNGACGCNN

NNGCGTCNN
PBM
Nakagawa et al.(2013)
FOXN2
0.731 0.756
FOXN2
M04835_2.00
Homo sapiens
NNGCGTSNNNNNSACGCNN

NNGCGTSNNNNNSACGCNN
SELEX
Yin et al.(2017)
FOXN2_eDBD_HT-SELEX
0.731 0.756
FOXN2
M04836_2.00
Homo sapiens
NGCATMRBNNYKATGCH

DGCATMRNNVYKATGCN
SELEX
Yin et al.(2017)
FOXN2_eDBD_Methyl-HT-SELEX
0.731 0.756
CHES-1-like
M01013_2.00
Drosophila melanogaster
NNNHHRMNNN

NNNKYDDNNN
PBM
Nakagawa et al.(2013)
CHES-1-like
0.694 0.698
CHES-1-like
M03745_2.00
Drosophila melanogaster
DHRTAAACAAW

WTTGTTTAYDH
SELEX
Nitta et al.(2015)
CHES-1-like_1
0.694 0.698
CHES-1-like
M03746_2.00
Drosophila melanogaster
GCGTCNNYRTAAACAAW

WTTGTTTAYRNNGACGC
SELEX
Nitta et al.(2015)
CHES-1-like_2
0.694 0.698
CHES-1-like
M03747_2.00
Drosophila melanogaster
WNVGCGTCHWNGACGCNNW

WNNGCGTCNWDGACGCBNW
SELEX
Nitta et al.(2015)
CHES-1-like_3
0.694 0.698
CHES-1-like
M03748_2.00
Drosophila melanogaster
DNGCGTCHNNDGACGCNN

NNGCGTCHNNDGACGCNH
SELEX
Nitta et al.(2015)
CHES-1-like_4
0.694 0.698
CHES-1-like
M03749_2.00
Drosophila melanogaster
HNGCGTCHNGACGCNN

NNGCGTCNDGACGCND
SELEX
Nitta et al.(2015)
CHES-1-like_5
0.694 0.698
TriadG17577
M01018_2.00
Trichoplax adhaerens
NNNHHDNNNN

NNNNHDDNNN
PBM
Nakagawa et al.(2013)
FoxN2_3
0.664 0.756
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000016824 Forkhead 114 204
ENSDARP00000120674 Forkhead 114 204
ENSDARP00000126371 Forkhead 114 204

Links

Other Forkhead family TFs
Other Danio rerio TFs

205 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Ogr01321 Ophisaurus gracilis Ogr01321 I 0.890
FOXN3 Otolemur garnettii ENSOGAG00000001733 I 0.890
ENSAMXG00000018596 Astyanax mexicanus ENSAMXG00000018596 I 0.890
ches1 Danio rerio ENSDARG00000043553 I 0.885
FOXN3 Dasypus novemcinctus ENSDNOG00000003188 I 0.865
ENSSTOG00000014643 Ictidomys tridecemlineatus ENSSTOG00000014643 I 0.865
FOXN3 Oryctolagus cuniculus ENSOCUG00000004392 I 0.865
ENSDORG00000007387 Dipodomys ordii ENSDORG00000007387 I 0.865
FOXN3 Tupaia belangeri ENSTBEG00000003603 I 0.865
FOXN3 Macaca mulatta ENSMMUG00000019898 I 0.865
Foxn3 Rattus norvegicus ENSRNOG00000004709 I 0.865
ENSP00000261302 Macaca fascicularis ENSP00000261302 I 0.865
FOXN3 Cavia porcellus ENSCPOG00000004079 I 0.865
FOXN3 Meleagris gallopavo ENSMGAG00000013026 I 0.865
ENSLACG00000015298 Latimeria chalumnae ENSLACG00000015298 I 0.865
FOXN3 Equus caballus ENSECAG00000026917 I 0.865
ENSEEUG00000008958 Erinaceus europaeus ENSEEUG00000008958 I 0.865
FOXN3 Gallus gallus ENSGALG00000010665 I 0.865
FOXN3 Gorilla gorilla ENSGGOG00000023852 I 0.865
ENSLOCG00000008977 Lepisosteus oculatus ENSLOCG00000008977 I 0.865
FOXN3 Loxodonta africana ENSLAFG00000016005 I 0.865
Foxn3 Mus musculus ENSMUSG00000033713 I 0.865
ENSMPUG00000008174 Mustela putorius furo ENSMPUG00000008174 I 0.865
ENSTGUG00000012441 Taeniopygia guttata ENSTGUG00000012441 I 0.865
ENSNLEG00000016989 Nomascus leucogenys ENSNLEG00000016989 I 0.865
ENSFALG00000012332 Ficedula albicollis ENSFALG00000012332 I 0.865
FOXN3 Homo sapiens ENSG00000053254 D 0.865
FOXN3 Callithrix jacchus ENSCJAG00000017620 I 0.865
FOXN3 Ochotona princeps ENSOPRG00000002931 I 0.865
FOXN3 Procavia capensis ENSPCAG00000013761 I 0.865
FOXN3 Anolis carolinensis ENSACAG00000012791 I 0.865
ENSPSIG00000013517 Pelodiscus sinensis ENSPSIG00000013517 I 0.865
ENSAPLG00000009060 Anas platyrhynchos ENSAPLG00000009060 I 0.865
ENSAMEG00000001627 Ailuropoda melanoleuca ENSAMEG00000001627 I 0.865
ENSSHAG00000010850 Sarcophilus harrisii ENSSHAG00000010850 I 0.865
FOXN3 Tursiops truncatus ENSTTRG00000000817 I 0.865
FOXN3 Canis familiaris ENSCAFG00000011068 I 0.865
ENSPANG00000016397 Papio anubis ENSPANG00000016397 I 0.865
FOXN3 Myotis lucifugus ENSMLUG00000008780 I 0.865
FOXN3 Pan troglodytes ENSPTRG00000006614 I 0.865
FOXN3 Sus scrofa ENSSSCG00000002429 I 0.865
foxn3 Xenopus tropicalis XB-GENE-483117 I 0.865
ches1 Oryzias latipes ENSORLG00000010729 I 0.864
ches1 Takifugu rubripes ENSTRUG00000003497 I 0.864
ENSONIG00000001158 Oreochromis niloticus ENSONIG00000001158 I 0.864
ENSPFOG00000001305 Poecilia formosa ENSPFOG00000001305 I 0.864
gw.10.104.1 Branchiostoma floridae gw.10.104.1 I 0.857
gw.384.13.1 Branchiostoma floridae gw.384.13.1 I 0.857
FOXN3 Felis catus ENSFCAG00000012929 I 0.853
ENSAMXG00000009484 Astyanax mexicanus ENSAMXG00000009484 I 0.852
Cmyd_10013867 Chelonia mydas Cmyd_10013867 I 0.837
foxn3.L Xenopus laevis XB-GENE-6448222 I 0.827
foxn3.S Xenopus laevis XB-GENE-864945 I 0.827
CGI_10011126 Crassostrea gigas CGI_10011126 I 0.825
FOXN3 Monodelphis domestica ENSMODG00000003001 I 0.802
ENSBTAG00000046684 Bos taurus ENSBTAG00000046684 I 0.796
NEMVEDRAFT_v1g67209 Nematostella vectensis NEMVEDRAFT_v1g67209 D 0.795
Sakowv30028653m.g Saccoglossus kowalevskii Sakowv30028653m.g I 0.792
CapteG102038 Capitella teleta CapteG102038 I 0.790
LotgiG138633 Lottia gigantea LotgiG138633 I 0.788
L798_02484 Zootermopsis nevadensis L798_02484 I 0.787
BGLB008394 Biomphalaria glabrata BGLB008394 I 0.785
ENSPFOG00000015286 Poecilia formosa ENSPFOG00000015286 I 0.784
foxn2b Oryzias latipes ENSORLG00000011005 I 0.779
foxn2b Takifugu rubripes ENSTRUG00000013724 I 0.779
foxn2b Tetraodon nigroviridis ENSTNIG00000016601 I 0.779
PHUM603440 Pediculus humanus PHUM603440 I 0.773
CABZ01056727.1 Danio rerio ENSDARG00000055574 I 0.772
KGM_12006 Danaus plexippus KGM_12006 I 0.772
ENSAMXG00000001149 Astyanax mexicanus ENSAMXG00000001149 I 0.772
HMEL010214 Heliconius melpomene HMEL010214 I 0.772
Hsal_12079--XP_625198.2_APIME Harpegnathos saltator Hsal_12079--XP_625198.2_APIME I 0.771
Cflo_06973--XP_625198.2_APIME Camponotus floridanus Cflo_06973--XP_625198.2_APIME I 0.771
NV15444 Nasonia vitripennis NV15444 I 0.771
ENSXMAG00000001667 Xiphophorus maculatus ENSXMAG00000001667 I 0.771
GB45298 Apis mellifera GB45298 I 0.771
SINV12530 Solenopsis invicta SINV12530 I 0.771
ENSONIG00000009856 Oreochromis niloticus ENSONIG00000009856 I 0.767
foxn2b Gasterosteus aculeatus ENSGACG00000005486 I 0.767
FOXN3 Pteropus vampyrus ENSPVAG00000002967 I 0.765
ACYPI005943 Acyrthosiphon pisum ACYPI005943 I 0.765
ENSTNIG00000009703 Tetraodon nigroviridis ENSTNIG00000009703 I 0.763
foxn2b Danio rerio ENSDARG00000045105 I 0.756
ENSXMAG00000013148 Xiphophorus maculatus ENSXMAG00000013148 I 0.753
ENSPFOG00000021830 Poecilia formosa ENSPFOG00000021830 I 0.753
ENSAMXG00000008216 Astyanax mexicanus ENSAMXG00000008216 I 0.751
Myotis_brandtii_FOXN3_10022354 Myotis brandtii Myotis_brandtii_FOXN3_10022354 I 0.750
ENSPMAG00000007171 Petromyzon marinus ENSPMAG00000007171 I 0.750
YQE_02614 Dendroctonus ponderosae YQE_02614 I 0.749
YQE_02630 Dendroctonus ponderosae YQE_02630 I 0.749
YQE_03399 Dendroctonus ponderosae YQE_03399 I 0.749
ENSOARG00000003363 Ovis aries ENSOARG00000003363 I 0.748
Foxn2 Dipodomys ordii ENSDORG00000007020 I 0.747
ENSFALG00000011112 Ficedula albicollis ENSFALG00000011112 I 0.747
ENSGACG00000017049 Gasterosteus aculeatus ENSGACG00000017049 I 0.743
FOXN2 Anolis carolinensis ENSACAG00000014236 I 0.742
FOXN2 Meleagris gallopavo ENSMGAG00000005062 I 0.742
ENSAPLG00000016372 Anas platyrhynchos ENSAPLG00000016372 I 0.742
Ogr07715 Ophisaurus gracilis Ogr07715 I 0.742
tetur19g01540 Tetranychus urticae tetur19g01540 I 0.738
SPU_015243 Strongylocentrotus purpuratus SPU_015243 I 0.733
ENSLOCG00000016292 Lepisosteus oculatus ENSLOCG00000016292 I 0.733
FOXN2 Equus caballus ENSECAG00000008390 I 0.732
FOXN2 Oryctolagus cuniculus ENSOCUG00000009784 I 0.732
foxn2 Xenopus tropicalis XB-GENE-952918 I 0.731
FOXN2 Vicugna pacos ENSVPAG00000009218 I 0.731
ENSSHAG00000001461 Sarcophilus harrisii ENSSHAG00000001461 I 0.731
FOXN2 Sorex araneus ENSSARG00000003696 I 0.731
Foxn2 Rattus norvegicus ENSRNOG00000040110 I 0.731
FOXN2 Sus scrofa ENSSSCG00000029593 I 0.731
ENSP00000394031-D1 Bos grunniens ENSP00000394031-D1 I 0.731
Myotis_brandtii_FOXN2_10033482 Myotis brandtii Myotis_brandtii_FOXN2_10033482 I 0.731
ENSSTOG00000000862 Ictidomys tridecemlineatus ENSSTOG00000000862 I 0.731
ENSP00000343633 Macaca fascicularis ENSP00000343633 I 0.731
Pvit_15105 Pogona vitticeps Pvit_15105 I 0.731
ENSTSYG00000014704 Tarsius syrichta ENSTSYG00000014704 I 0.731
ENSPANG00000013263 Papio anubis ENSPANG00000013263 I 0.731
FOXN2 Felis catus ENSFCAG00000022828 I 0.731
FOXN2 Echinops telfairi ENSETEG00000007413 I 0.731
FOXN2 Homo sapiens ENSG00000170802 D 0.731
FOXN2 Gorilla gorilla ENSGGOG00000008171 I 0.731
ENSMEUG00000000214 Macropus eugenii ENSMEUG00000000214 I 0.731
FOXN2 Loxodonta africana ENSLAFG00000012466 I 0.731
FOXN2 Erinaceus europaeus ENSEEUG00000015228 I 0.731
ENSCSAG00000013601 Chlorocebus sabaeus ENSCSAG00000013601 I 0.731
FOXN2 Bos taurus ENSBTAG00000015151 I 0.731
ENSAMEG00000006413 Ailuropoda melanoleuca ENSAMEG00000006413 I 0.731
FOXN2 Canis familiaris ENSCAFG00000029603 I 0.731
FOXN2 Callithrix jacchus ENSCJAG00000010894 I 0.731
ENSCPOG00000026162 Cavia porcellus ENSCPOG00000026162 I 0.731
FOXN2 Myotis lucifugus ENSMLUG00000017567 I 0.731
FOXN2 Dasypus novemcinctus ENSDNOG00000035609 I 0.731
FOXN2 Macaca mulatta ENSMMUG00000020677 I 0.731
Foxn2 Mus musculus ENSMUSG00000034998 I 0.731
ENSOARG00000004763 Ovis aries ENSOARG00000004763 I 0.731
ENSNLEG00000008649 Nomascus leucogenys ENSNLEG00000008649 I 0.731
FOXN2 Procavia capensis ENSPCAG00000005254 I 0.731
FOXN2 Otolemur garnettii ENSOGAG00000011745 I 0.731
ENSMPUG00000010993 Mustela putorius furo ENSMPUG00000010993 I 0.731
FOXN2 Pan troglodytes ENSPTRG00000011908 I 0.731
FOXN2 Monodelphis domestica ENSMODG00000001169 I 0.731
ENSPPYG00000012423 Pongo abelii ENSPPYG00000012423 I 0.731
ENSLACG00000006234 Latimeria chalumnae ENSLACG00000006234 I 0.728
ENSGMOG00000016028 Gadus morhua ENSGMOG00000016028 I 0.727
ENSLACG00000013808 Latimeria chalumnae ENSLACG00000013808 I 0.727
foxn2.S Xenopus laevis XB-GENE-952923 I 0.727
ENSGMOG00000018188 Gadus morhua ENSGMOG00000018188 I 0.726
ENSCAFG00000017486 Canis familiaris ENSCAFG00000017486 I 0.725
ENSCJAG00000034742 Callithrix jacchus ENSCJAG00000034742 I 0.722
ENSTNIG00000002057 Tetraodon nigroviridis ENSTNIG00000002057 I 0.721
ML077613a Mnemiopsis leidyi ML077613a I 0.720
TC030764 Tribolium castaneum TC030764 I 0.720
si:ch211-145o7.3 Danio rerio ENSDARG00000061548 I 0.719
ENSCJAG00000033311 Callithrix jacchus ENSCJAG00000033311 I 0.718
ENSLOCG00000000880 Lepisosteus oculatus ENSLOCG00000000880 I 0.714
ENSOANG00000003851 Ornithorhynchus anatinus ENSOANG00000003851 I 0.711
ACEP19737 Atta cephalotes ACEP19737 I 0.709
ENSCJAG00000032477 Callithrix jacchus ENSCJAG00000032477 I 0.708
Ocbimv22027168m.g Octopus bimaculoides Ocbimv22027168m.g I 0.702
AFAF006655 Anopheles farauti AFAF006655 I 0.701
AFUN001697 Anopheles funestus AFUN001697 I 0.701
CpipJ_CPIJ002020 Culex pipiens CpipJ_CPIJ002020 I 0.701
ACUA012004 Anopheles culicifacies ACUA012004 I 0.701
AATE000717 Anopheles atroparvus AATE000717 I 0.701
CPIJ002020 Culex quinquefasciatus CPIJ002020 I 0.701
AGAP013178 Anopheles gambiae AGAP013178 I 0.701
AARA006907 Anopheles arabiensis AARA006907 I 0.701
AMAM012648 Anopheles maculatus AMAM012648 I 0.701
AMEC021917 Anopheles melas AMEC021917 I 0.701
AAEL008832 Aedes aegypti AAEL008832 I 0.701
LLOJ006903 Lutzomyia longipalpis LLOJ006903 I 0.701
ASTEI05563 Anopheles stephensi ASTEI05563 I 0.701
ASIS003979 Anopheles sinensis ASIS003979 I 0.701
AMIN003345 Anopheles minimus AMIN003345 I 0.701
AQUA002332 Anopheles quadriannulatus AQUA002332 I 0.701
ENSGMOG00000003346 Gadus morhua ENSGMOG00000003346 I 0.700
MDOA011809 Musca domestica MDOA011809 I 0.698
LCUP017282 Lucilia cuprina LCUP017282 I 0.698
BGIBMGA008311 Bombyx mori BGIBMGA008311 I 0.697
ADAC006994 Anopheles darlingi ADAC006994 I 0.696
AALB008878 Anopheles albimanus AALB008878 I 0.696
GE17515 Drosophila yakuba FBgn0234975 I 0.694
GG17614 Drosophila erecta FBgn0109837 I 0.694
GI14920 Drosophila mojavensis FBgn0137671 I 0.694
GM17463 Drosophila sechellia FBgn0172373 I 0.694
GL14605 Drosophila persimilis FBgn0152210 I 0.694
GF21122 Drosophila ananassae FBgn0098127 I 0.694
GJ18953 Drosophila virilis FBgn0206099 I 0.694
GH12836 Drosophila grimshawi FBgn0120315 I 0.694
GK19775 Drosophila willistoni FBgn0221773 I 0.694
GA27773 Drosophila pseudoobscura FBgn0249137 I 0.694
CHES-1-like Drosophila melanogaster FBgn0029504 D 0.694
CLEC003208 Cimex lectularius CLEC003208 I 0.694
ADIR002427 Anopheles dirus ADIR002427 I 0.692
FOXN2 Pteropus vampyrus ENSPVAG00000003737 I 0.690
foxn2/3 Ciona intestinalis ENSCING00000001109 I 0.689
FOXN2 Choloepus hoffmanni ENSCHOG00000000109 I 0.688
FOXN2 Ochotona princeps ENSOPRG00000007661 I 0.686
ENSCSAVG00000007298 Ciona savignyi ENSCSAVG00000007298 I 0.685
ENSAMXG00000011599 Astyanax mexicanus ENSAMXG00000011599 I 0.681
SMAR014430 Strigamia maritima SMAR014430 I 0.681
DAPPUDRAFT_8207 Daphnia pulex DAPPUDRAFT_8207 I 0.677
AMEM007698 Anopheles merus AMEM007698 I 0.664
TriadG17577 Trichoplax adhaerens TriadG17577 D 0.664