ches1 (Danio rerio)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 ENSDARG00000043553 T185520_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FOXN3
M01227_2.00 		Homo sapiens
GTAAACAA
TTGTTTAC		 PBM
Lambert et al.(2019)
pTH11266 		0.860 0.895
NEMVEDRAFT_v1g67209
M01016_2.00 		Nematostella vectensis
NNDWHRMNNN
NNNKYDWHNN		 PBM
Nakagawa et al.(2013)
FoxN2-3_Nvec 		0.793 0.767
FOXN2
M01007_2.00 		Homo sapiens
NNGACGCNN
NNGCGTCNN		 PBM
Nakagawa et al.(2013)
FOXN2 		0.727 0.721
FOXN2
M04835_2.00 		Homo sapiens
NNGCGTSNNNNNSACGCNN
NNGCGTSNNNNNSACGCNN		 SELEX
Yin et al.(2017)
FOXN2_eDBD_HT-SELEX 		0.727 0.721
FOXN2
M04836_2.00 		Homo sapiens
NGCATMRBNNYKATGCH
DGCATMRNNVYKATGCN		 SELEX
Yin et al.(2017)
FOXN2_eDBD_Methyl-HT-SELEX 		0.727 0.721
CHES-1-like
M01013_2.00 		Drosophila melanogaster
NNNHHRMNNN
NNNKYDDNNN		 PBM
Nakagawa et al.(2013)
CHES-1-like 		0.696 0.686
CHES-1-like
M03745_2.00 		Drosophila melanogaster
DHRTAAACAAW
WTTGTTTAYDH		 SELEX
Nitta et al.(2015)
CHES-1-like_1 		0.696 0.686
CHES-1-like
M03746_2.00 		Drosophila melanogaster
GCGTCNNYRTAAACAAW
WTTGTTTAYRNNGACGC		 SELEX
Nitta et al.(2015)
CHES-1-like_2 		0.696 0.686
CHES-1-like
M03747_2.00 		Drosophila melanogaster
WNVGCGTCHWNGACGCNNW
WNNGCGTCNWDGACGCBNW		 SELEX
Nitta et al.(2015)
CHES-1-like_3 		0.696 0.686
CHES-1-like
M03748_2.00 		Drosophila melanogaster
DNGCGTCHNNDGACGCNN
NNGCGTCHNNDGACGCNH		 SELEX
Nitta et al.(2015)
CHES-1-like_4 		0.696 0.686
CHES-1-like
M03749_2.00 		Drosophila melanogaster
HNGCGTCHNGACGCNN
NNGCGTCNDGACGCND		 SELEX
Nitta et al.(2015)
CHES-1-like_5 		0.696 0.686
TriadG17577
M01018_2.00 		Trichoplax adhaerens
NNNHHDNNNN
NNNNHDDNNN		 PBM
Nakagawa et al.(2013)
FoxN2_3 		0.665 0.744
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000094912 Forkhead 110 199
ENSDARP00000115349 Forkhead 110 199

Links

Other Forkhead family TFs
Other Danio rerio TFs

205 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
foxn3 Danio rerio ENSDARG00000012833 I 0.885
FOXN3 Otolemur garnettii ENSOGAG00000001733 I 0.885
ENSAMXG00000018596 Astyanax mexicanus ENSAMXG00000018596 I 0.885
Ogr01321 Ophisaurus gracilis Ogr01321 I 0.885
ches1 Oryzias latipes ENSORLG00000010729 I 0.861
ches1 Takifugu rubripes ENSTRUG00000003497 I 0.861
ENSPFOG00000001305 Poecilia formosa ENSPFOG00000001305 I 0.861
ENSONIG00000001158 Oreochromis niloticus ENSONIG00000001158 I 0.861
FOXN3 Callithrix jacchus ENSCJAG00000017620 I 0.860
ENSSTOG00000014643 Ictidomys tridecemlineatus ENSSTOG00000014643 I 0.860
ENSDORG00000007387 Dipodomys ordii ENSDORG00000007387 I 0.860
ENSFALG00000012332 Ficedula albicollis ENSFALG00000012332 I 0.860
FOXN3 Equus caballus ENSECAG00000026917 I 0.860
ENSNLEG00000016989 Nomascus leucogenys ENSNLEG00000016989 I 0.860
ENSEEUG00000008958 Erinaceus europaeus ENSEEUG00000008958 I 0.860
FOXN3 Homo sapiens ENSG00000053254 D 0.860
FOXN3 Ochotona princeps ENSOPRG00000002931 I 0.860
ENSP00000261302 Macaca fascicularis ENSP00000261302 I 0.860
FOXN3 Oryctolagus cuniculus ENSOCUG00000004392 I 0.860
ENSTGUG00000012441 Taeniopygia guttata ENSTGUG00000012441 I 0.860
FOXN3 Tupaia belangeri ENSTBEG00000003603 I 0.860
ENSPANG00000016397 Papio anubis ENSPANG00000016397 I 0.860
Foxn3 Mus musculus ENSMUSG00000033713 I 0.860
FOXN3 Cavia porcellus ENSCPOG00000004079 I 0.860
ENSLOCG00000008977 Lepisosteus oculatus ENSLOCG00000008977 I 0.860
FOXN3 Dasypus novemcinctus ENSDNOG00000003188 I 0.860
FOXN3 Procavia capensis ENSPCAG00000013761 I 0.860
FOXN3 Myotis lucifugus ENSMLUG00000008780 I 0.860
FOXN3 Macaca mulatta ENSMMUG00000019898 I 0.860
foxn3 Xenopus tropicalis XB-GENE-483117 I 0.860
FOXN3 Gorilla gorilla ENSGGOG00000023852 I 0.860
ENSLACG00000015298 Latimeria chalumnae ENSLACG00000015298 I 0.860
FOXN3 Loxodonta africana ENSLAFG00000016005 I 0.860
FOXN3 Meleagris gallopavo ENSMGAG00000013026 I 0.860
Foxn3 Rattus norvegicus ENSRNOG00000004709 I 0.860
ENSSHAG00000010850 Sarcophilus harrisii ENSSHAG00000010850 I 0.860
FOXN3 Pan troglodytes ENSPTRG00000006614 I 0.860
FOXN3 Canis familiaris ENSCAFG00000011068 I 0.860
FOXN3 Anolis carolinensis ENSACAG00000012791 I 0.860
ENSAPLG00000009060 Anas platyrhynchos ENSAPLG00000009060 I 0.860
FOXN3 Tursiops truncatus ENSTTRG00000000817 I 0.860
ENSMPUG00000008174 Mustela putorius furo ENSMPUG00000008174 I 0.860
ENSPSIG00000013517 Pelodiscus sinensis ENSPSIG00000013517 I 0.860
FOXN3 Sus scrofa ENSSSCG00000002429 I 0.860
FOXN3 Gallus gallus ENSGALG00000010665 I 0.860
ENSAMEG00000001627 Ailuropoda melanoleuca ENSAMEG00000001627 I 0.860
gw.384.13.1 Branchiostoma floridae gw.384.13.1 I 0.853
gw.10.104.1 Branchiostoma floridae gw.10.104.1 I 0.853
ENSAMXG00000009484 Astyanax mexicanus ENSAMXG00000009484 I 0.849
FOXN3 Felis catus ENSFCAG00000012929 I 0.848
Cmyd_10013867 Chelonia mydas Cmyd_10013867 I 0.831
CGI_10011126 Crassostrea gigas CGI_10011126 I 0.826
foxn3.L Xenopus laevis XB-GENE-6448222 I 0.822
foxn3.S Xenopus laevis XB-GENE-864945 I 0.822
FOXN3 Monodelphis domestica ENSMODG00000003001 I 0.797
Sakowv30028653m.g Saccoglossus kowalevskii Sakowv30028653m.g I 0.793
NEMVEDRAFT_v1g67209 Nematostella vectensis NEMVEDRAFT_v1g67209 D 0.793
CapteG102038 Capitella teleta CapteG102038 I 0.791
ENSBTAG00000046684 Bos taurus ENSBTAG00000046684 I 0.791
ENSPFOG00000015286 Poecilia formosa ENSPFOG00000015286 I 0.789
L798_02484 Zootermopsis nevadensis L798_02484 I 0.789
LotgiG138633 Lottia gigantea LotgiG138633 I 0.788
BGLB008394 Biomphalaria glabrata BGLB008394 I 0.785
foxn2b Tetraodon nigroviridis ENSTNIG00000016601 I 0.784
foxn2b Oryzias latipes ENSORLG00000011005 I 0.784
foxn2b Takifugu rubripes ENSTRUG00000013724 I 0.784
ENSAMXG00000001149 Astyanax mexicanus ENSAMXG00000001149 I 0.777
CABZ01056727.1 Danio rerio ENSDARG00000055574 I 0.777
KGM_12006 Danaus plexippus KGM_12006 I 0.774
HMEL010214 Heliconius melpomene HMEL010214 I 0.774
ENSONIG00000009856 Oreochromis niloticus ENSONIG00000009856 I 0.772
foxn2b Gasterosteus aculeatus ENSGACG00000005486 I 0.772
Cflo_06973--XP_625198.2_APIME Camponotus floridanus Cflo_06973--XP_625198.2_APIME I 0.772
PHUM603440 Pediculus humanus PHUM603440 I 0.772
GB45298 Apis mellifera GB45298 I 0.772
NV15444 Nasonia vitripennis NV15444 I 0.772
SINV12530 Solenopsis invicta SINV12530 I 0.772
Hsal_12079--XP_625198.2_APIME Harpegnathos saltator Hsal_12079--XP_625198.2_APIME I 0.772
ENSXMAG00000001667 Xiphophorus maculatus ENSXMAG00000001667 I 0.768
ACYPI005943 Acyrthosiphon pisum ACYPI005943 I 0.767
foxn2b Danio rerio ENSDARG00000045105 I 0.761
FOXN3 Pteropus vampyrus ENSPVAG00000002967 I 0.760
ENSTNIG00000009703 Tetraodon nigroviridis ENSTNIG00000009703 I 0.760
ENSPFOG00000021830 Poecilia formosa ENSPFOG00000021830 I 0.754
ENSXMAG00000013148 Xiphophorus maculatus ENSXMAG00000013148 I 0.754
YQE_02614 Dendroctonus ponderosae YQE_02614 I 0.751
ENSAMXG00000008216 Astyanax mexicanus ENSAMXG00000008216 I 0.751
YQE_03399 Dendroctonus ponderosae YQE_03399 I 0.751
YQE_02630 Dendroctonus ponderosae YQE_02630 I 0.751
ENSPMAG00000007171 Petromyzon marinus ENSPMAG00000007171 I 0.747
Myotis_brandtii_FOXN3_10022354 Myotis brandtii Myotis_brandtii_FOXN3_10022354 I 0.745
ENSGACG00000017049 Gasterosteus aculeatus ENSGACG00000017049 I 0.743
ENSFALG00000011112 Ficedula albicollis ENSFALG00000011112 I 0.743
ENSOARG00000003363 Ovis aries ENSOARG00000003363 I 0.743
Foxn2 Dipodomys ordii ENSDORG00000007020 I 0.743
tetur19g01540 Tetranychus urticae tetur19g01540 I 0.739
FOXN2 Anolis carolinensis ENSACAG00000014236 I 0.738
FOXN2 Meleagris gallopavo ENSMGAG00000005062 I 0.738
Ogr07715 Ophisaurus gracilis Ogr07715 I 0.738
ENSAPLG00000016372 Anas platyrhynchos ENSAPLG00000016372 I 0.738
ENSLOCG00000016292 Lepisosteus oculatus ENSLOCG00000016292 I 0.736
SPU_015243 Strongylocentrotus purpuratus SPU_015243 I 0.733
ENSGMOG00000016028 Gadus morhua ENSGMOG00000016028 I 0.732
foxn2.S Xenopus laevis XB-GENE-952923 I 0.731
ENSLACG00000006234 Latimeria chalumnae ENSLACG00000006234 I 0.729
ENSSHAG00000001461 Sarcophilus harrisii ENSSHAG00000001461 I 0.727
foxn2 Xenopus tropicalis XB-GENE-952918 I 0.727
FOXN2 Sus scrofa ENSSSCG00000029593 I 0.727
ENSP00000343633 Macaca fascicularis ENSP00000343633 I 0.727
FOXN2 Sorex araneus ENSSARG00000003696 I 0.727
ENSTSYG00000014704 Tarsius syrichta ENSTSYG00000014704 I 0.727
ENSP00000394031-D1 Bos grunniens ENSP00000394031-D1 I 0.727
Myotis_brandtii_FOXN2_10033482 Myotis brandtii Myotis_brandtii_FOXN2_10033482 I 0.727
Pvit_15105 Pogona vitticeps Pvit_15105 I 0.727
ENSSTOG00000000862 Ictidomys tridecemlineatus ENSSTOG00000000862 I 0.727
FOXN2 Vicugna pacos ENSVPAG00000009218 I 0.727
ENSPANG00000013263 Papio anubis ENSPANG00000013263 I 0.727
FOXN2 Felis catus ENSFCAG00000022828 I 0.727
FOXN2 Echinops telfairi ENSETEG00000007413 I 0.727
FOXN2 Erinaceus europaeus ENSEEUG00000015228 I 0.727
FOXN2 Homo sapiens ENSG00000170802 D 0.727
FOXN2 Gorilla gorilla ENSGGOG00000008171 I 0.727
ENSMEUG00000000214 Macropus eugenii ENSMEUG00000000214 I 0.727
FOXN2 Loxodonta africana ENSLAFG00000012466 I 0.727
Foxn2 Rattus norvegicus ENSRNOG00000040110 I 0.727
FOXN2 Dasypus novemcinctus ENSDNOG00000035609 I 0.727
FOXN2 Bos taurus ENSBTAG00000015151 I 0.727
ENSAMEG00000006413 Ailuropoda melanoleuca ENSAMEG00000006413 I 0.727
FOXN2 Canis familiaris ENSCAFG00000029603 I 0.727
FOXN2 Callithrix jacchus ENSCJAG00000010894 I 0.727
ENSCSAG00000013601 Chlorocebus sabaeus ENSCSAG00000013601 I 0.727
ENSCPOG00000026162 Cavia porcellus ENSCPOG00000026162 I 0.727
FOXN2 Myotis lucifugus ENSMLUG00000017567 I 0.727
FOXN2 Equus caballus ENSECAG00000008390 I 0.727
FOXN2 Oryctolagus cuniculus ENSOCUG00000009784 I 0.727
Foxn2 Mus musculus ENSMUSG00000034998 I 0.727
ENSOARG00000004763 Ovis aries ENSOARG00000004763 I 0.727
ENSMPUG00000010993 Mustela putorius furo ENSMPUG00000010993 I 0.727
ENSNLEG00000008649 Nomascus leucogenys ENSNLEG00000008649 I 0.727
FOXN2 Macaca mulatta ENSMMUG00000020677 I 0.727
FOXN2 Otolemur garnettii ENSOGAG00000011745 I 0.727
ENSPPYG00000012423 Pongo abelii ENSPPYG00000012423 I 0.727
FOXN2 Pan troglodytes ENSPTRG00000011908 I 0.727
FOXN2 Procavia capensis ENSPCAG00000005254 I 0.727
FOXN2 Monodelphis domestica ENSMODG00000001169 I 0.727
ENSGMOG00000018188 Gadus morhua ENSGMOG00000018188 I 0.725
ENSLACG00000013808 Latimeria chalumnae ENSLACG00000013808 I 0.724
ENSTNIG00000002057 Tetraodon nigroviridis ENSTNIG00000002057 I 0.721
TC030764 Tribolium castaneum TC030764 I 0.721
ML077613a Mnemiopsis leidyi ML077613a I 0.720
si:ch211-145o7.3 Danio rerio ENSDARG00000061548 I 0.720
ENSCAFG00000017486 Canis familiaris ENSCAFG00000017486 I 0.720
ENSCJAG00000034742 Callithrix jacchus ENSCJAG00000034742 I 0.717
ENSCJAG00000033311 Callithrix jacchus ENSCJAG00000033311 I 0.713
ENSLOCG00000000880 Lepisosteus oculatus ENSLOCG00000000880 I 0.713
ACEP19737 Atta cephalotes ACEP19737 I 0.709
ENSOANG00000003851 Ornithorhynchus anatinus ENSOANG00000003851 I 0.706
ENSCJAG00000032477 Callithrix jacchus ENSCJAG00000032477 I 0.703
ACUA012004 Anopheles culicifacies ACUA012004 I 0.702
CpipJ_CPIJ002020 Culex pipiens CpipJ_CPIJ002020 I 0.702
AFAF006655 Anopheles farauti AFAF006655 I 0.702
AARA006907 Anopheles arabiensis AARA006907 I 0.702
AGAP013178 Anopheles gambiae AGAP013178 I 0.702
AFUN001697 Anopheles funestus AFUN001697 I 0.702
AATE000717 Anopheles atroparvus AATE000717 I 0.702
AMEC021917 Anopheles melas AMEC021917 I 0.702
ASTEI05563 Anopheles stephensi ASTEI05563 I 0.702
AAEL008832 Aedes aegypti AAEL008832 I 0.702
LLOJ006903 Lutzomyia longipalpis LLOJ006903 I 0.702
ASIS003979 Anopheles sinensis ASIS003979 I 0.702
AQUA002332 Anopheles quadriannulatus AQUA002332 I 0.702
CPIJ002020 Culex quinquefasciatus CPIJ002020 I 0.702
AMIN003345 Anopheles minimus AMIN003345 I 0.702
AMAM012648 Anopheles maculatus AMAM012648 I 0.702
Ocbimv22027168m.g Octopus bimaculoides Ocbimv22027168m.g I 0.701
MDOA011809 Musca domestica MDOA011809 I 0.700
LCUP017282 Lucilia cuprina LCUP017282 I 0.700
BGIBMGA008311 Bombyx mori BGIBMGA008311 I 0.699
ENSGMOG00000003346 Gadus morhua ENSGMOG00000003346 I 0.699
ADAC006994 Anopheles darlingi ADAC006994 I 0.698
AALB008878 Anopheles albimanus AALB008878 I 0.698
GI14920 Drosophila mojavensis FBgn0137671 I 0.696
GM17463 Drosophila sechellia FBgn0172373 I 0.696
GL14605 Drosophila persimilis FBgn0152210 I 0.696
GJ18953 Drosophila virilis FBgn0206099 I 0.696
GE17515 Drosophila yakuba FBgn0234975 I 0.696
GK19775 Drosophila willistoni FBgn0221773 I 0.696
CHES-1-like Drosophila melanogaster FBgn0029504 D 0.696
GA27773 Drosophila pseudoobscura FBgn0249137 I 0.696
GH12836 Drosophila grimshawi FBgn0120315 I 0.696
GF21122 Drosophila ananassae FBgn0098127 I 0.696
GG17614 Drosophila erecta FBgn0109837 I 0.696
ADIR002427 Anopheles dirus ADIR002427 I 0.694
CLEC003208 Cimex lectularius CLEC003208 I 0.693
foxn2/3 Ciona intestinalis ENSCING00000001109 I 0.690
FOXN2 Pteropus vampyrus ENSPVAG00000003737 I 0.686
ENSCSAVG00000007298 Ciona savignyi ENSCSAVG00000007298 I 0.686
ENSAMXG00000011599 Astyanax mexicanus ENSAMXG00000011599 I 0.686
FOXN2 Choloepus hoffmanni ENSCHOG00000000109 I 0.684
SMAR014430 Strigamia maritima SMAR014430 I 0.682
FOXN2 Ochotona princeps ENSOPRG00000007661 I 0.681
DAPPUDRAFT_8207 Daphnia pulex DAPPUDRAFT_8207 I 0.677
AMEM007698 Anopheles merus AMEM007698 I 0.666
TriadG17577 Trichoplax adhaerens TriadG17577 D 0.665