ches1 (Danio rerio)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 ENSDARG00000043553 T185520_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
FOXN3
M01227_2.00
Homo sapiens
GTAAACAA

TTGTTTAC
PBM
Lambert et al.(2019)
pTH11266
0.860 0.895
NEMVEDRAFT_v1g67209
M01016_2.00
Nematostella vectensis
NNDWHRMNNN

NNNKYDWHNN
PBM
Nakagawa et al.(2013)
FoxN2-3_Nvec
0.793 0.767
FOXN2
M01007_2.00
Homo sapiens
NNGACGCNN

NNGCGTCNN
PBM
Nakagawa et al.(2013)
FOXN2
0.727 0.721
FOXN2
M04835_2.00
Homo sapiens
NNGCGTSNNNNNSACGCNN

NNGCGTSNNNNNSACGCNN
SELEX
Yin et al.(2017)
FOXN2_eDBD_HT-SELEX
0.727 0.721
FOXN2
M04836_2.00
Homo sapiens
NGCATMRBNNYKATGCH

DGCATMRNNVYKATGCN
SELEX
Yin et al.(2017)
FOXN2_eDBD_Methyl-HT-SELEX
0.727 0.721
CHES-1-like
M01013_2.00
Drosophila melanogaster
NNNHHRMNNN

NNNKYDDNNN
PBM
Nakagawa et al.(2013)
CHES-1-like
0.696 0.686
CHES-1-like
M03745_2.00
Drosophila melanogaster
DHRTAAACAAW

WTTGTTTAYDH
SELEX
Nitta et al.(2015)
CHES-1-like_1
0.696 0.686
CHES-1-like
M03746_2.00
Drosophila melanogaster
GCGTCNNYRTAAACAAW

WTTGTTTAYRNNGACGC
SELEX
Nitta et al.(2015)
CHES-1-like_2
0.696 0.686
CHES-1-like
M03747_2.00
Drosophila melanogaster
WNVGCGTCHWNGACGCNNW

WNNGCGTCNWDGACGCBNW
SELEX
Nitta et al.(2015)
CHES-1-like_3
0.696 0.686
CHES-1-like
M03748_2.00
Drosophila melanogaster
DNGCGTCHNNDGACGCNN

NNGCGTCHNNDGACGCNH
SELEX
Nitta et al.(2015)
CHES-1-like_4
0.696 0.686
CHES-1-like
M03749_2.00
Drosophila melanogaster
HNGCGTCHNGACGCNN

NNGCGTCNDGACGCND
SELEX
Nitta et al.(2015)
CHES-1-like_5
0.696 0.686
TriadG17577
M01018_2.00
Trichoplax adhaerens
NNNHHDNNNN

NNNNHDDNNN
PBM
Nakagawa et al.(2013)
FoxN2_3
0.665 0.744
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSDARP00000094912 Forkhead 110 199
ENSDARP00000115349 Forkhead 110 199

Links

Other Forkhead family TFs
Other Danio rerio TFs

205 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ANCCEY_03457 Ancylostoma ceylanicum ANCCEY_03457 N 0.000
ANCDUO_02619 Ancylostoma duodenale ANCDUO_02619 N 0.000
ANCDUO_12670 Ancylostoma duodenale ANCDUO_12670 N 0.000
ASIM_0000091301 Anisakis simplex ASIM_0000091301 I 0.000
DME_0000390001 Dracunculus medinensis DME_0000390001 N 0.000
HelroG186716 Helobdella robusta HelroG186716 I 0.000
HPBE_0002664601 Heligmosomoides bakeri HPBE_0002664601 N 0.000
Minc06478 Meloidogyne incognita Minc06478 N 0.000
NBR_0000522801 Nippostrongylus brasiliensis NBR_0000522801 I 0.000
NECAME_19535 Necator americanus NECAME_19535 N 0.000
Ppa-sma-2 Pristionchus pacificus PPA15247 N 0.000
SVUK_0000145101 Strongylus vulgaris SVUK_0000145101 N 0.000