FOXP4 (Procavia capensis)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 ENSPCAG00000004821 T186728_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
FOXP1
M00836_2.00
Homo sapiens
NRTMAACANN

NNTGTTKAYN
PBM
Gabut et al.(2011)
pEX0123
0.798 0.926
FOXP1
M00837_2.00
Homo sapiens
DGTAAACAA

TTGTTTACH
PBM
Gabut et al.(2011)
pEX0124
0.798 0.926
FOXP1
M01976_2.00
Homo sapiens
RTAAACAA

TTGTTTAY
PBM
Weirauch et al.(2014)
pTH5656
0.798 0.926
Foxp1
M00793_2.00
Mus musculus
NRTMAAYAN

NTRTTKAYN
PBM
Weirauch et al.(2013)
pTH3855
0.798 0.926
FOXP1
M04811_2.00
Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN

NTGTTKWBYRTNVNNNNNNAYNRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX
0.798 0.926
FOXP1
M08115_2.00
Homo sapiens
NDGTAAACAVNN

NNBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0481.2
0.798 0.926
FOXP1
M09086_2.00
Homo sapiens
RKAAACAVM

KBTGTTTMY
Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A
0.798 0.926
FOXP1
M09541_2.00
Homo sapiens
NDGTAAACAVNN

NNBTGTTTACHN
Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006
0.798 0.926
FOXP1
M10536_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXP1_01
0.798 0.926
FOXP1
M04812_2.00
Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH

DTGTTKWBYRTNVNNNNNNAYVRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX
0.798 0.926
Foxp2
M00792_2.00
Mus musculus
RTAAACAD

HTGTTTAY
PBM
Weirauch et al.(2013)
pTH1288
0.789 0.901
FOXP2
M05866_2.00
Homo sapiens
RTAAAYAWNN

NNWTRTTTAY
SMiLE-seq
Isakova et al.(2017)
FOXP2
0.789 0.901
FOXP2
M08116_2.00
Homo sapiens
NDGTAAACAVN

NBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0593.1
0.789 0.901
FOXP2
M09089_2.00
Homo sapiens
DGTAAACAV

BTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C
0.789 0.901
Foxp2
M09101_2.00
Mus musculus
NGTAAACAN

NTGTTTACN
Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A
0.789 0.901
FoxP
M03753_2.00
Drosophila melanogaster
AAACAACAACAA

TTGTTGTTGTTT
SELEX
Nitta et al.(2015)
CG16899_1
0.773 0.728
FoxP
M06201_2.00
Drosophila melanogaster
VRTAAACAA

TTGTTTAYB
B1H
Zhu et al.(2011)
CG16899_SANGER_5_FBgn0037735
0.773 0.728
FoxP
M06202_2.00
Drosophila melanogaster
VNNVBBAAAAAAAD

HTTTTTTTVVBNNB
B1H
Zhu et al.(2011)
CG2052_SANGER_2.5_FBgn0039905
0.773 0.728
FoxP
M06203_2.00
Drosophila melanogaster
NNNNNRAAAAAAWNN

NNWTTTTTTYNNNNN
B1H
Zhu et al.(2011)
CG2052_SOLEXA_2.5_FBgn0039905
0.773 0.728
FOXK2
M08118_2.00
Homo sapiens
NNRTAAACANN

NNTGTTTAYNN
ChIP-seq
Mathelier et al.(2014)
MA1103.1
0.699 0.444
FOXC1
M00259_2.00
Homo sapiens
RTAAACAW

WTGTTTAY
PBM
Barrera et al.(2016)
FOXC1_S82T
0.679 0.444
FOXC1
M00257_2.00
Homo sapiens
NNNVHHAAYA

TRTTDDBNNN
PBM
Barrera et al.(2016)
FOXC1_REF
0.679 0.432
Foxc1
M01982_2.00
Mus musculus
HNNRHMAAYA

TRTTKDYNND
PBM
Weirauch et al.(2014)
pTH2673
0.679 0.432
FOXC1
M03013_2.00
Homo sapiens
AWRTAAAYAAAYA

TRTTTRTTTAYWT
SELEX
Jolma et al.(2013)
FOXC1_1
0.679 0.432
FOXC1
M03014_2.00
Homo sapiens
NRWMAATATTKWYN

NRWMAATATTKWYN
SELEX
Jolma et al.(2013)
FOXC1_2
0.679 0.432
FOXC1
M03015_2.00
Homo sapiens
WRWRTMAAYAW

WTRTTKAYWYW
SELEX
Jolma et al.(2013)
FOXC1_3
0.679 0.432
Foxc1
M03059_2.00
Mus musculus
RTAAAYAAACA

TGTTTRTTTAY
SELEX
Jolma et al.(2013)
Foxc1_1
0.679 0.432
Foxc1
M03060_2.00
Mus musculus
RTAAACA

TGTTTAY
SELEX
Jolma et al.(2013)
Foxc1_2
0.679 0.432
FOXC1
M09083_2.00
Homo sapiens
SBWAWRTAAACADHN

NDHTGTTTAYWTWVS
Misc
Kulakovskiy et al.(2013)
FOXC1_HUMAN.H11MO.0.C
0.679 0.432
Foxc1
M09111_2.00
Mus musculus
SBWAWRTAAACADHN

NDHTGTTTAYWTWVS
Misc
Kulakovskiy et al.(2013)
FOXC1_MOUSE.H11MO.0.C
0.679 0.432
FOXC1
M10525_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXC1_Q4
0.679 0.432
FOXC1
M10526_2.00
Homo sapiens
TSTTTATTTACDBNVN

NBNVHGTAAATAAASA
Transfac
Matys et al.(2006)
V$FREAC3_01
0.679 0.432
FOXC1
M00253_2.00
Homo sapiens
NNHATAAWHAN

NTDWTTATDNN
PBM
Barrera et al.(2016)
FOXC1_F112S
0.679 0.420
FOXC1
M00255_2.00
Homo sapiens
NRTATATWHNNN

NNNDWATATAYN
PBM
Barrera et al.(2016)
FOXC1_L130F
0.679 0.420
FOXC1
M00256_2.00
Homo sapiens
NNNNWWTYAMAWN

NWTKTRAWWNNNN
PBM
Barrera et al.(2016)
FOXC1_P79L
0.679 0.420
FOXC1
M00258_2.00
Homo sapiens
NNNAMAAYANN

NNTRTTKTNNN
PBM
Barrera et al.(2016)
FOXC1_S131L
0.679 0.420
Foxo6
M00798_2.00
Mus musculus
NNNNHHRYDN

NHRYDDNNNN
PBM
Weirauch et al.(2013)
pTH3477
0.672 0.420
FOXO6
M03049_2.00
Homo sapiens
GTAAACATGTTTAC

GTAAACATGTTTAC
SELEX
Jolma et al.(2013)
FOXO6_1
0.672 0.420
FOXO6
M03050_2.00
Homo sapiens
GTAAACA

TGTTTAC
SELEX
Jolma et al.(2013)
FOXO6_2
0.672 0.420
FOXO6
M03051_2.00
Homo sapiens
TTTCCCCACACGMC

GKCGTGTGGGGAAA
SELEX
Jolma et al.(2013)
FOXO6_3
0.672 0.420
Foxo3
M00797_2.00
Mus musculus
RTMAACAN

NTGTTKAY
PBM
Weirauch et al.(2013)
pTH3749
0.670 0.420
FOXO3
M03019_2.00
Homo sapiens
GTAAACATGTTTAC

GTAAACATGTTTAC
SELEX
Jolma et al.(2013)
FOXO3_1
0.670 0.420
FOXO3
M03020_2.00
Homo sapiens
GTAAACAW

WTGTTTAC
SELEX
Jolma et al.(2013)
FOXO3_2
0.670 0.420
FOXO3
M03021_2.00
Homo sapiens
KTTCCCCACAC

GTGTGGGGAAM
SELEX
Jolma et al.(2013)
FOXO3_3
0.670 0.420
FOXO3
M04813_2.00
Homo sapiens
HHCCCCACACN

NGTGTGGGGDD
SELEX
Yin et al.(2017)
FOXO3_eDBD_HT-SELEX
0.670 0.420
FOXO3
M09087_2.00
Homo sapiens
DGTAAACAVV

BBTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXO3_HUMAN.H11MO.0.B
0.670 0.420
Foxo3
M09110_2.00
Mus musculus
DGTAAACAVV

BBTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXO3_MOUSE.H11MO.0.B
0.670 0.420
FOXO3
M10537_2.00
Homo sapiens
WAHGTAAACAAVND

HNBTTGTTTACDWW
Transfac
Matys et al.(2006)
V$FOXO3_01
0.670 0.420
FOXO3
M10538_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXO3A_Q1
0.670 0.420
FOXO3
M10539_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXO3A_Q3
0.670 0.420
FOXO3
M04814_2.00
Homo sapiens
NHCCCCACACV

BGTGTGGGGDN
SELEX
Yin et al.(2017)
FOXO3_eDBD_Methyl-HT-SELEX
0.670 0.420
SPU_025010
M01988_2.00
Strongylocentrotus purpuratus
NNVNHHAYAN

NTRTDDNBNN
PBM
Weirauch et al.(2014)
pTH6641
0.667 0.420
Foxj3
M00160_2.00
Mus musculus
NRTAAACAHN

NDTGTTTAYN
PBM
Badis et al.(2009)
Foxj3_0982
0.665 0.444
Foxj3
M01981_2.00
Mus musculus
VNHHAYANN

NNTRTDDNB
PBM
Weirauch et al.(2014)
pTH6591
0.665 0.444
Foxj3
M03055_2.00
Mus musculus
ACGGACACAAT

ATTGTGTCCGT
SELEX
Jolma et al.(2013)
Foxj3_1
0.665 0.444
Foxj3
M03056_2.00
Mus musculus
GTAAACARTMAACA

TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
Foxj3_2
0.665 0.444
Foxj3
M03057_2.00
Mus musculus
RTAAACAW

WTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_3
0.665 0.444
Foxj3
M03058_2.00
Mus musculus
RTAAACAWAAACA

TGTTTWTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_4
0.665 0.444
Foxj3
M09102_2.00
Mus musculus
WAAMMATAAACAN

NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A
0.665 0.444
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPCAP00000004543 Forkhead 472 554

Links

Other Forkhead family TFs
Other Procavia capensis TFs

705 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
BHLH039 Arabidopsis lyrata fgenesh1_pm.C_scaffold_5001751 N 0.000
Bo01495s010 Brassica oleracea Bo01495s010 N 0.000
Bo4g112570 Brassica oleracea Bo4g112570 N 0.000
Bo4g112590 Brassica oleracea Bo4g112590 N 0.000
Bo6g072500 Brassica oleracea Bo6g072500 N 0.000
Bo6g072510 Brassica oleracea Bo6g072510 N 0.000
Bostr.20505s0055 Boechera stricta Bostr.20505s0055 N 0.000
Bostr.20505s0056 Boechera stricta Bostr.20505s0056 N 0.000
Bra003260 Brassica rapa Bra003260 N 0.000
Bra014654 Brassica rapa Bra014654 N 0.000
Bra014657 Brassica rapa Bra014657 N 0.000
Bra014658 Brassica rapa Bra014658 N 0.000
Cagra.0578s0028 Capsella grandiflora Cagra.0578s0028 N 0.000
Carubv10017770m.g Capsella rubella Carubv10017770m.g N 0.000
Carubv10019130m.g Capsella rubella Carubv10019130m.g N 0.000
gene27422-v1.0-hybrid Fragaria vesca gene27422-v1.0-hybrid N 0.000
ORG2 Arabidopsis thaliana AT3G56970 N 0.000
POPTR_0006s03560 Populus trichocarpa POPTR_0006s03560 N 0.000
POPTR_0006s03590 Populus trichocarpa POPTR_0006s03590 N 0.000
SapurV1A.0196s0420 Salix purpurea SapurV1A.0196s0420 N 0.000
Solyc10g079660.1 Solanum lycopersicum Solyc10g079660.1 N 0.000
Thhalv10006189m.g Eutrema salsugineum Thhalv10006189m.g N 0.000
Thhalv10006191m.g Eutrema salsugineum Thhalv10006191m.g N 0.000
Thhalv10006491m.g Eutrema salsugineum Thhalv10006491m.g N 0.000