CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPSIG00000000867
(
Pelodiscus sinensis
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSPSIG00000000867
T186869_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXE1
M04845_2.00
Homo sapiens
BVYTAWRYAAACADN
NHTGTTTRYWTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_HT-SELEX
0.704
0.663
FOXE1
M04846_2.00
Homo sapiens
BVYTAARYAAACAWH
DWTGTTTRYTTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_Methyl-HT-SELEX
0.704
0.663
FOXL2
M04847_2.00
Homo sapiens
NVBGHMAACAH
DTGTTKDCVBN
SELEX
Yin et al.(2017)
FOXL2_FL_HT-SELEX
0.703
0.767
Foxl2
M09112_2.00
Mus musculus
DWDWRTAAACA
TGTTTAYWHWH
Misc
Kulakovskiy et al.(2013)
FOXL2_MOUSE.H11MO.0.C
0.703
0.767
FOXL2
M10560_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXL2_Q2
0.703
0.767
FOXL2
M10561_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXL2_Q5
0.703
0.767
FOXL2
M04848_2.00
Homo sapiens
HVCGWMAACAH
DTGTTKWCGBD
SELEX
Yin et al.(2017)
FOXL2_FL_Methyl-HT-SELEX
0.703
0.767
Foxl1
M00164_2.00
Mus musculus
NNNRTMAAYA
TRTTKAYNNN
PBM
Badis et al.(2009)
Foxl1_2809
0.688
0.674
FOXL1
M03034_2.00
Homo sapiens
RTAAACA
TGTTTAY
SELEX
Jolma et al.(2013)
FOXL1_1
0.688
0.674
FOXL1
M03035_2.00
Homo sapiens
NRTAAAYAAAYAN
NTRTTTRTTTAYN
SELEX
Jolma et al.(2013)
FOXL1_2
0.688
0.674
FOXL1
M10558_2.00
Homo sapiens
DHNVHATAAAYAHNNN
NNNDTRTTTATDBNDH
Transfac
Matys et al.(2006)
V$FREAC7_01
0.688
0.674
foxe3
M01228_2.00
Xenopus tropicalis
WNNVHHMAYW
WRTKDDBNNW
PBM
Lambert et al.(2019)
pTH9824
0.686
0.686
let-381
M00664_2.00
Caenorhabditis elegans
RTAAACAW
WTGTTTAY
PBM
Narasimhan et al.(2015)
pTH9057
0.672
0.500
FOXD2
M03042_2.00
Homo sapiens
NRTMAAYRTTWDYN
NRHWAAYRTTKAYN
SELEX
Jolma et al.(2013)
FOXD2_1
0.664
0.674
FOXD2
M03043_2.00
Homo sapiens
RTAAAYA
TRTTTAY
SELEX
Jolma et al.(2013)
FOXD2_2
0.664
0.674
FOXD2
M04851_2.00
Homo sapiens
HWASAATAAYAWWN
NWWTRTTATTSTWD
SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_1
0.664
0.674
FOXD2
M04852_2.00
Homo sapiens
VYWANRTAAAYAH
DTRTTTAYNTWRB
SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_2
0.664
0.674
FOXD1
M02681_2.00
Homo sapiens
GTAAACAD
HTGTTTAC
SELEX
Mathelier et al.(2014)
MA0031.1
0.664
0.674
FOXD1
M10567_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FREAC4_02
0.664
0.674
FOXD2
M04853_2.00
Homo sapiens
HWACAATAACRWWN
NWWYGTTATTGTWD
SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_1
0.664
0.674
FOXD2
M04854_2.00
Homo sapiens
RYTRNGTMAACRD
HYGTTKACNYARY
SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_2
0.664
0.674
Foxd1
M10570_2.00
Mus musculus
SYWAWGTAAACADHVN
NBDHTGTTTACWTWRS
Transfac
Matys et al.(2006)
V$FREAC4_01
0.664
0.663
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPSIP00000000866
Forkhead
35
124
KPPYSYVALIAMAIRESPEQRLPLSGIYQYIVGRFPYYRLGQKGWQNSIRHNLSLNQCFLKLPREPGAERKGCYWTLDPAFHDMFQPENY
Links
Other
Forkhead
family TFs
Other
Pelodiscus sinensis
TFs
278 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy