Foxe3 (Rattus norvegicus)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 ENSRNOG00000007770 T186974_2.00 Ensembl (2018-Dec-8) Link out
NCBI Gene Info:
transcription factor responsible for tissue specific gene regulation and development [RGD, Feb 2006]

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Gm5294
M01984_2.00
Mus musculus
NNKRTAAACANN

NNTGTTTAYMNN
PBM
Weirauch et al.(2014)
pTH3802
0.694 0.581
FOXE1
M04845_2.00
Homo sapiens
BVYTAWRYAAACADN

NHTGTTTRYWTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_HT-SELEX
0.690 0.814
FOXE1
M04846_2.00
Homo sapiens
BVYTAARYAAACAWH

DWTGTTTRYTTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_Methyl-HT-SELEX
0.690 0.814
FOXD2
M03042_2.00
Homo sapiens
NRTMAAYRTTWDYN

NRHWAAYRTTKAYN
SELEX
Jolma et al.(2013)
FOXD2_1
0.689 0.721
FOXD2
M03043_2.00
Homo sapiens
RTAAAYA

TRTTTAY
SELEX
Jolma et al.(2013)
FOXD2_2
0.689 0.721
FOXD2
M04851_2.00
Homo sapiens
HWASAATAAYAWWN

NWWTRTTATTSTWD
SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_1
0.689 0.721
FOXD2
M04852_2.00
Homo sapiens
VYWANRTAAAYAH

DTRTTTAYNTWRB
SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_2
0.689 0.721
FOXD1
M02681_2.00
Homo sapiens
GTAAACAD

HTGTTTAC
SELEX
Mathelier et al.(2014)
MA0031.1
0.689 0.721
Foxd1
M10570_2.00
Mus musculus
SYWAWGTAAACADHVN

NBDHTGTTTACWTWRS
Transfac
Matys et al.(2006)
V$FREAC4_01
0.689 0.721
FOXD1
M10567_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FREAC4_02
0.689 0.721
FOXD2
M04853_2.00
Homo sapiens
HWACAATAACRWWN

NWWYGTTATTGTWD
SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_1
0.689 0.721
FOXD2
M04854_2.00
Homo sapiens
RYTRNGTMAACRD

HYGTTKACNYARY
SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_2
0.689 0.721
FOXL1
M03034_2.00
Homo sapiens
RTAAACA

TGTTTAY
SELEX
Jolma et al.(2013)
FOXL1_1
0.687 0.709
FOXL1
M03035_2.00
Homo sapiens
NRTAAAYAAAYAN

NTRTTTRTTTAYN
SELEX
Jolma et al.(2013)
FOXL1_2
0.687 0.709
FOXL1
M10558_2.00
Homo sapiens
DHNVHATAAAYAHNNN

NNNDTRTTTATDBNDH
Transfac
Matys et al.(2006)
V$FREAC7_01
0.687 0.709
Foxl1
M00164_2.00
Mus musculus
NNNRTMAAYA

TRTTKAYNNN
PBM
Badis et al.(2009)
Foxl1_2809
0.687 0.698
fd64A
M06197_2.00
Drosophila melanogaster
KVWAAACA

TGTTTWBM
B1H
Zhu et al.(2011)
fd64A_SANGER_5_FBgn0004895
0.685 0.628
FOXD4L4
M10564_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXD4L4_01
0.681 0.698
foxe3
M01228_2.00
Xenopus tropicalis
WNNVHHMAYW

WRTKDDBNNW
PBM
Lambert et al.(2019)
pTH9824
0.676 0.802
FOXF2
M02680_2.00
Homo sapiens
BNHNSRTAAACAHN

NDTGTTTAYSNDNV
SELEX
Mathelier et al.(2014)
MA0030.1
0.673 0.581
FOXF2
M10548_2.00
Homo sapiens
BNHNBRTAAACAHNVN

NBNDTGTTTAYVNDNV
Transfac
Matys et al.(2006)
V$FREAC2_01
0.673 0.581
fd59A
M03739_2.00
Drosophila melanogaster
HWAWRTAAACAWW

WWTGTTTAYWTWD
SELEX
Nitta et al.(2015)
fd59A_1
0.666 0.698
fd59A
M03740_2.00
Drosophila melanogaster
WWAVAATAACAHN

NDTGTTATTBTWW
SELEX
Nitta et al.(2015)
fd59A_2
0.666 0.698
fd59A
M03741_2.00
Drosophila melanogaster
YWRWRTAAAYAHH

DDTRTTTAYWYWR
SELEX
Nitta et al.(2015)
fd59A_3
0.666 0.698
fd59A
M03742_2.00
Drosophila melanogaster
MWACAAYAAYAHW

WDTRTTRTTGTWK
SELEX
Nitta et al.(2015)
fd59A_4
0.666 0.698
FOXD3
M03044_2.00
Homo sapiens
NRTMAAYRTTWDYN

NRHWAAYRTTKAYN
SELEX
Jolma et al.(2013)
FOXD3_1
0.666 0.698
FOXD3
M03045_2.00
Homo sapiens
RTAAAYA

TRTTTAY
SELEX
Jolma et al.(2013)
FOXD3_2
0.666 0.698
FOXD3
M04855_2.00
Homo sapiens
VHWRHRTAMACW

WGTKTAYDYWDB
SELEX
Yin et al.(2017)
FOXD3_eDBD_HT-SELEX
0.666 0.698
Foxd3
M09114_2.00
Mus musculus
DVNWRDRNAAACAVN

NBTGTTTNYHYWNBH
Misc
Kulakovskiy et al.(2013)
FOXD3_MOUSE.H11MO.0.C
0.666 0.698
FOXD3
M10565_2.00
Homo sapiens
RADHAAAYAWWH

DWWTRTTTDHTY
Transfac
Matys et al.(2006)
V$FOXD3_01
0.666 0.698
FOXD3
M10566_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HFH2_Q5
0.666 0.698
FOXD3
M04856_2.00
Homo sapiens
VYWRHRTAAACW

WGTTTAYDYWRB
SELEX
Yin et al.(2017)
FOXD3_eDBD_Methyl-HT-SELEX
0.666 0.698
FOXF1
M10529_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKHL5_Q3
0.665 0.593
FOXF1
M10530_2.00
Homo sapiens
YRHATAAACAHNB

VNDTGTTTATDYR
Transfac
Matys et al.(2006)
V$HFH8_01
0.665 0.593
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSRNOP00000010208 Forkhead 64 153

Links

Other Forkhead family TFs
Other Rattus norvegicus TFs

557 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
ACEP26309 Atta cephalotes ACEP26309 I 0.000
ACYPI003971 Acyrthosiphon pisum ACYPI003971 I 0.000
Afo_R013999 Aptenodytes forsteri Afo_R013999 I 0.000
Alligator_sinensis_CCG003052.1 Alligator sinensis Alligator_sinensis_CCG003052.1 I 0.000
CAA76309 Xenopus laevis CAA76309 I 0.000
CEBPA Pan troglodytes ENSPTRG00000038687 I 0.000
CEBPA Otolemur garnettii ENSOGAG00000024661 I 0.000
cebpa Danio rerio ENSDARG00000036074 I 0.000
CEBPA Dasypus novemcinctus ENSDNOG00000041488 I 0.000
CEBPA Ornithorhynchus anatinus ENSOANG00000008144 I 0.000
Cebpa Mus musculus ENSMUSG00000034957 D 0.000
CEBPA Macaca mulatta ENSMMUG00000006124 I 0.000
CEBPA Loxodonta africana ENSLAFG00000030435 I 0.000
CEBPA Taeniopygia guttata ENSTGUG00000009472 I 0.000
CEBPA Homo sapiens ENSG00000245848 D 0.000
cebpa Tetraodon nigroviridis ENSTNIG00000003102 I 0.000
CEBPA Sus scrofa ENSSSCG00000002866 I 0.000
Cebpa Rattus norvegicus ENSRNOG00000010918 I 0.000
cebpa Takifugu rubripes ENSTRUG00000006383 I 0.000
CEBPB Gorilla gorilla ENSGGOG00000025010 I 0.000
cebpb Xenopus tropicalis XB-GENE-479779 I 0.000
CEBPB Myotis lucifugus ENSMLUG00000002060 I 0.000
CEBPB Tursiops truncatus ENSTTRG00000003985 I 0.000
cebpb Takifugu rubripes ENSTRUG00000007449 I 0.000
CEBPB Gallus gallus ENSGALG00000008014 I 0.000
Cebpb Mus musculus ENSMUSG00000056501 D 0.000
CEBPB Homo sapiens ENSG00000172216 D 0.000
CEBPB Oryctolagus cuniculus ENSOCUG00000024667 I 0.000
CEBPB Taeniopygia guttata ENSTGUG00000008707 I 0.000
CEBPB Otolemur garnettii ENSOGAG00000026467 I 0.000
cebpb Oryzias latipes ENSORLG00000015032 I 0.000
Cebpb Rattus norvegicus ENSRNOG00000057347 I 0.000
CEBPB Pan troglodytes ENSPTRG00000041263 I 0.000
CEBPB Pteropus vampyrus ENSPVAG00000003541 I 0.000
CEBPB Callithrix jacchus ENSCJAG00000000526 I 0.000
cebpb Danio rerio ENSDARG00000042725 I 0.000
CEBPB Dasypus novemcinctus ENSDNOG00000041573 I 0.000
CEBPB Canis familiaris ENSCAFG00000031326 I 0.000
CEBPB Anolis carolinensis ENSACAG00000015567 I 0.000
cebpb.L Xenopus laevis XB-GENE-865306 I 0.000
CEBPE Cavia porcellus ENSCPOG00000014049 I 0.000
Cebpe Mus musculus ENSMUSG00000052435 D 0.000
CEBPE Callithrix jacchus ENSCJAG00000008065 I 0.000
CEBPE Bos taurus ENSBTAG00000005952 I 0.000
CEBPE Procavia capensis ENSPCAG00000015039 I 0.000
CEBPE Erinaceus europaeus ENSEEUG00000005848 I 0.000
CEBPE Pteropus vampyrus ENSPVAG00000005264 I 0.000
CEBPE Sus scrofa ENSSSCG00000002033 I 0.000
CEBPE Equus caballus ENSECAG00000012883 I 0.000
Cebpe Rattus norvegicus ENSRNOG00000014282 I 0.000
CEBPE Oryctolagus cuniculus ENSOCUG00000022235 I 0.000
CEBPE Otolemur garnettii ENSOGAG00000001312 I 0.000
CEBPE Monodelphis domestica ENSMODG00000004586 I 0.000
CEBPE Macaca mulatta ENSMMUG00000019652 I 0.000
CEBPE Gorilla gorilla ENSGGOG00000007419 I 0.000
CEBPE Homo sapiens ENSG00000092067 D 0.000
cebpe Xenopus tropicalis XB-GENE-853430 I 0.000
CEBPE Anolis carolinensis ENSACAG00000007268 I 0.000
CEBPE Felis catus ENSFCAG00000002334 I 0.000
CEBPE Loxodonta africana ENSLAFG00000031400 I 0.000
CEBPE Pan troglodytes ENSPTRG00000006162 I 0.000
CEBPE Tursiops truncatus ENSTTRG00000017229 I 0.000
CEBPE Echinops telfairi ENSETEG00000000035 I 0.000
CEBPE Myotis lucifugus ENSMLUG00000030209 I 0.000
Cflo_01516--XP_394681.2_APIME Camponotus floridanus Cflo_01516--XP_394681.2_APIME I 0.000
CLEC002077 Cimex lectularius CLEC002077 I 0.000
Cmyd_10017449 Chelonia mydas Cmyd_10017449 I 0.000
EBP Gallus gallus ENSGALG00000026525 I 0.000
ENSAMEG00000007625 Ailuropoda melanoleuca ENSAMEG00000007625 I 0.000
ENSAMEG00000008255 Ailuropoda melanoleuca ENSAMEG00000008255 I 0.000
ENSAMEG00000013456 Ailuropoda melanoleuca ENSAMEG00000013456 I 0.000
ENSAMXG00000018723 Astyanax mexicanus ENSAMXG00000018723 I 0.000
ENSAMXG00000026122 Astyanax mexicanus ENSAMXG00000026122 I 0.000
ENSCAFG00000007407 Canis familiaris ENSCAFG00000007407 I 0.000
ENSCAFG00000011433 Canis familiaris ENSCAFG00000011433 I 0.000
ENSCPOG00000000811 Cavia porcellus ENSCPOG00000000811 I 0.000
ENSCPOG00000023297 Cavia porcellus ENSCPOG00000023297 I 0.000
ENSCSAG00000016086 Chlorocebus sabaeus ENSCSAG00000016086 I 0.000
ENSCSAG00000018515 Chlorocebus sabaeus ENSCSAG00000018515 I 0.000
ENSCSAG00000018746 Chlorocebus sabaeus ENSCSAG00000018746 I 0.000
ENSFALG00000007785 Ficedula albicollis ENSFALG00000007785 I 0.000
ENSFALG00000014081 Ficedula albicollis ENSFALG00000014081 I 0.000
ENSGMOG00000019534 Gadus morhua ENSGMOG00000019534 I 0.000
ENSLACG00000002076 Latimeria chalumnae ENSLACG00000002076 I 0.000
ENSLACG00000005924 Latimeria chalumnae ENSLACG00000005924 I 0.000
ENSLAFG00000026180 Loxodonta africana ENSLAFG00000026180 I 0.000
ENSLOCG00000017586 Lepisosteus oculatus ENSLOCG00000017586 I 0.000
ENSLOCG00000018358 Lepisosteus oculatus ENSLOCG00000018358 I 0.000
ENSMEUG00000000063 Macropus eugenii ENSMEUG00000000063 I 0.000
ENSMICG00000002591 Microcebus murinus ENSMICG00000002591 I 0.000
ENSMMUG00000004874 Macaca mulatta ENSMMUG00000004874 I 0.000
ENSMODG00000016314 Monodelphis domestica ENSMODG00000016314 I 0.000
ENSMPUG00000006815 Mustela putorius furo ENSMPUG00000006815 I 0.000
ENSMPUG00000007593 Mustela putorius furo ENSMPUG00000007593 I 0.000
ENSMPUG00000019019 Mustela putorius furo ENSMPUG00000019019 I 0.000
ENSNLEG00000014958 Nomascus leucogenys ENSNLEG00000014958 I 0.000
ENSOANG00000007645 Ornithorhynchus anatinus ENSOANG00000007645 I 0.000
ENSOARG00000004414 Ovis aries ENSOARG00000004414 I 0.000
ENSOARG00000013395 Ovis aries ENSOARG00000013395 I 0.000
ENSOARG00000019360 Ovis aries ENSOARG00000019360 I 0.000
ENSONIG00000021137 Oreochromis niloticus ENSONIG00000021137 I 0.000
ENSP00000206513 Macaca fascicularis ENSP00000206513 I 0.000
ENSPANG00000002974 Papio anubis ENSPANG00000002974 I 0.000
ENSPANG00000007537 Papio anubis ENSPANG00000007537 I 0.000
ENSPANG00000019646 Papio anubis ENSPANG00000019646 I 0.000
ENSPFOG00000020954 Poecilia formosa ENSPFOG00000020954 I 0.000
ENSPMAG00000004124 Petromyzon marinus ENSPMAG00000004124 I 0.000
ENSPPYG00000005659 Pongo abelii ENSPPYG00000005659 I 0.000
ENSPPYG00000011124 Pongo abelii ENSPPYG00000011124 I 0.000
ENSPSIG00000000363 Pelodiscus sinensis ENSPSIG00000000363 I 0.000
ENSSHAG00000013989 Sarcophilus harrisii ENSSHAG00000013989 I 0.000
ENSSHAG00000014918 Sarcophilus harrisii ENSSHAG00000014918 I 0.000
ENSSSCG00000024816 Sus scrofa ENSSSCG00000024816 I 0.000
ENSSSCG00000028739 Sus scrofa ENSSSCG00000028739 I 0.000
ENSSTOG00000007204 Ictidomys tridecemlineatus ENSSTOG00000007204 I 0.000
ENSTBEG00000017246 Tupaia belangeri ENSTBEG00000017246 I 0.000
ENSXMAG00000019665 Xiphophorus maculatus ENSXMAG00000019665 I 0.000
GB44204 Apis mellifera GB44204 I 0.000
HHAL004160-PA Halyomorpha halys HHAL004160-PA I 0.000
Hsal_02456--XP_394681.2_APIME Harpegnathos saltator Hsal_02456--XP_394681.2_APIME I 0.000
L798_13978 Zootermopsis nevadensis L798_13978 I 0.000
LDEC017703 Leptinotarsa decemlineata LDEC017703 I 0.000
ML145410a Mnemiopsis leidyi ML145410a I 0.000
Myotis_brandtii_CEBPE_10009435 Myotis brandtii Myotis_brandtii_CEBPE_10009435 I 0.000
NEMVEDRAFT_v1g114346 Nematostella vectensis NEMVEDRAFT_v1g114346 I 0.000
NV14868 Nasonia vitripennis NV14868 I 0.000
Ogr08265 Ophisaurus gracilis Ogr08265 I 0.000
Ogr08532 Ophisaurus gracilis Ogr08532 I 0.000
PHUM433250 Pediculus humanus PHUM433250 I 0.000
Pvit_03335 Pogona vitticeps Pvit_03335 I 0.000
SINV13631 Solenopsis invicta SINV13631 I 0.000
TC009220 Tribolium castaneum TC009220 I 0.000
YQE_11799 Dendroctonus ponderosae YQE_11799 I 0.000