CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
foxj1b
(
Tetraodon nigroviridis
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
ENSTNIG00000012916
T187203_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxj1
M00161_2.00
Mus musculus
NNHAAACAAANN
NNTTTGTTTDNN
PBM
Badis et al.(2009)
Foxj1_3125
0.788
0.779
FOXJ1
M10547_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HFH4_01
0.788
0.779
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSTNIP00000002261
Forkhead
125
215
KPPYSYASLICMAMQASQQPKVTLSTIYNWITENFCYYRHAEPSWQQNSIRHNLSLNKCFKKVPRQKNEPGKGGFWQIDPQYADMFVNGIF
ENSTNIP00000015896
Forkhead
134
224
KPPYSYASLICMAMQASQQPKVTLSTIYNWITENFCYYRHAEPSWQQNSIRHNLSLNKCFKKVPRQKNEPGKGGFWQIDPQYADMFVNGIF
Links
Other
Forkhead
family TFs
Other
Tetraodon nigroviridis
TFs
155 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy