foxe1 (Takifugu rubripes)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 ENSTRUG00000010676 T187248_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
foxe3
M01228_2.00
Xenopus tropicalis
WNNVHHMAYW

WRTKDDBNNW
PBM
Lambert et al.(2019)
pTH9824
0.833 0.895
FOXE1
M04845_2.00
Homo sapiens
BVYTAWRYAAACADN

NHTGTTTRYWTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_HT-SELEX
0.816 0.907
FOXE1
M04846_2.00
Homo sapiens
BVYTAARYAAACAWH

DWTGTTTRYTTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_Methyl-HT-SELEX
0.816 0.907
FOXC1
M00257_2.00
Homo sapiens
NNNVHHAAYA

TRTTDDBNNN
PBM
Barrera et al.(2016)
FOXC1_REF
0.808 0.698
Foxc1
M01982_2.00
Mus musculus
HNNRHMAAYA

TRTTKDYNND
PBM
Weirauch et al.(2014)
pTH2673
0.808 0.698
FOXC1
M03013_2.00
Homo sapiens
AWRTAAAYAAAYA

TRTTTRTTTAYWT
SELEX
Jolma et al.(2013)
FOXC1_1
0.808 0.698
FOXC1
M03014_2.00
Homo sapiens
NRWMAATATTKWYN

NRWMAATATTKWYN
SELEX
Jolma et al.(2013)
FOXC1_2
0.808 0.698
FOXC1
M03015_2.00
Homo sapiens
WRWRTMAAYAW

WTRTTKAYWYW
SELEX
Jolma et al.(2013)
FOXC1_3
0.808 0.698
Foxc1
M03059_2.00
Mus musculus
RTAAAYAAACA

TGTTTRTTTAY
SELEX
Jolma et al.(2013)
Foxc1_1
0.808 0.698
Foxc1
M03060_2.00
Mus musculus
RTAAACA

TGTTTAY
SELEX
Jolma et al.(2013)
Foxc1_2
0.808 0.698
FOXC1
M09083_2.00
Homo sapiens
SBWAWRTAAACADHN

NDHTGTTTAYWTWVS
Misc
Kulakovskiy et al.(2013)
FOXC1_HUMAN.H11MO.0.C
0.808 0.698
Foxc1
M09111_2.00
Mus musculus
SBWAWRTAAACADHN

NDHTGTTTAYWTWVS
Misc
Kulakovskiy et al.(2013)
FOXC1_MOUSE.H11MO.0.C
0.808 0.698
FOXC1
M10525_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXC1_Q4
0.808 0.698
FOXC1
M10526_2.00
Homo sapiens
TSTTTATTTACDBNVN

NBNVHGTAAATAAASA
Transfac
Matys et al.(2006)
V$FREAC3_01
0.808 0.698
FOXC1
M00258_2.00
Homo sapiens
NNNAMAAYANN

NNTRTTKTNNN
PBM
Barrera et al.(2016)
FOXC1_S131L
0.808 0.698
FOXC1
M00253_2.00
Homo sapiens
NNHATAAWHAN

NTDWTTATDNN
PBM
Barrera et al.(2016)
FOXC1_F112S
0.808 0.686
FOXC1
M00255_2.00
Homo sapiens
NRTATATWHNNN

NNNDWATATAYN
PBM
Barrera et al.(2016)
FOXC1_L130F
0.808 0.686
FOXC1
M00256_2.00
Homo sapiens
NNNNWWTYAMAWN

NWTKTRAWWNNNN
PBM
Barrera et al.(2016)
FOXC1_P79L
0.808 0.686
FOXC1
M00259_2.00
Homo sapiens
RTAAACAW

WTGTTTAY
PBM
Barrera et al.(2016)
FOXC1_S82T
0.808 0.686
FOXD3
M03044_2.00
Homo sapiens
NRTMAAYRTTWDYN

NRHWAAYRTTKAYN
SELEX
Jolma et al.(2013)
FOXD3_1
0.787 0.733
FOXD3
M03045_2.00
Homo sapiens
RTAAAYA

TRTTTAY
SELEX
Jolma et al.(2013)
FOXD3_2
0.787 0.733
FOXD3
M04855_2.00
Homo sapiens
VHWRHRTAMACW

WGTKTAYDYWDB
SELEX
Yin et al.(2017)
FOXD3_eDBD_HT-SELEX
0.787 0.733
Foxd3
M09114_2.00
Mus musculus
DVNWRDRNAAACAVN

NBTGTTTNYHYWNBH
Misc
Kulakovskiy et al.(2013)
FOXD3_MOUSE.H11MO.0.C
0.787 0.733
FOXD3
M10565_2.00
Homo sapiens
RADHAAAYAWWH

DWWTRTTTDHTY
Transfac
Matys et al.(2006)
V$FOXD3_01
0.787 0.733
FOXD3
M10566_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HFH2_Q5
0.787 0.733
FOXD3
M04856_2.00
Homo sapiens
VYWRHRTAAACW

WGTTTAYDYWRB
SELEX
Yin et al.(2017)
FOXD3_eDBD_Methyl-HT-SELEX
0.787 0.733
FOXL1
M03034_2.00
Homo sapiens
RTAAACA

TGTTTAY
SELEX
Jolma et al.(2013)
FOXL1_1
0.785 0.709
FOXL1
M03035_2.00
Homo sapiens
NRTAAAYAAAYAN

NTRTTTRTTTAYN
SELEX
Jolma et al.(2013)
FOXL1_2
0.785 0.709
FOXL1
M10558_2.00
Homo sapiens
DHNVHATAAAYAHNNN

NNNDTRTTTATDBNDH
Transfac
Matys et al.(2006)
V$FREAC7_01
0.785 0.709
Foxl1
M00164_2.00
Mus musculus
NNNRTMAAYA

TRTTKAYNNN
PBM
Badis et al.(2009)
Foxl1_2809
0.785 0.698
FOXC1
M00254_2.00
Homo sapiens
RRTAAACANN

NNTGTTTAYY
PBM
Barrera et al.(2016)
FOXC1_I126M
0.784 0.686
Foxc2
M00796_2.00
Mus musculus
HNNRHMAAYA

TRTTKDYNND
PBM
Weirauch et al.(2013)
pTH3796
0.776 0.674
FOXC2
M03036_2.00
Homo sapiens
NRTMAATATTDWYN

NRWHAATATTKAYN
SELEX
Jolma et al.(2013)
FOXC2_1
0.776 0.674
FOXC2
M03037_2.00
Homo sapiens
RTAAAYAAACA

TGTTTRTTTAY
SELEX
Jolma et al.(2013)
FOXC2_2
0.776 0.674
FOXC2
M03038_2.00
Homo sapiens
WAHRTMAAYAWW

WWTRTTKAYDTW
SELEX
Jolma et al.(2013)
FOXC2_3
0.776 0.674
FOXC2
M04841_2.00
Homo sapiens
NHVNRYMAACAH

DTGTTKRYNBDN
SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_1
0.776 0.674
FOXC2
M04842_2.00
Homo sapiens
RHAMAYAAACAH

DTGTTTRTKTDY
SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_2
0.776 0.674
FOXC2
M10559_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKHL14_Q2
0.776 0.674
FOXC2
M04843_2.00
Homo sapiens
NHNNRYMAACAN

NTGTTKRYNNDN
SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_1
0.776 0.674
FOXC2
M04844_2.00
Homo sapiens
VHMMAYAAACAN

NTGTTTRTKKDB
SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_2
0.776 0.674
let-381
M00664_2.00
Caenorhabditis elegans
RTAAACAW

WTGTTTAY
PBM
Narasimhan et al.(2015)
pTH9057
0.773 0.523
fd59A
M03739_2.00
Drosophila melanogaster
HWAWRTAAACAWW

WWTGTTTAYWTWD
SELEX
Nitta et al.(2015)
fd59A_1
0.771 0.733
fd59A
M03740_2.00
Drosophila melanogaster
WWAVAATAACAHN

NDTGTTATTBTWW
SELEX
Nitta et al.(2015)
fd59A_2
0.771 0.733
fd59A
M03741_2.00
Drosophila melanogaster
YWRWRTAAAYAHH

DDTRTTTAYWYWR
SELEX
Nitta et al.(2015)
fd59A_3
0.771 0.733
fd59A
M03742_2.00
Drosophila melanogaster
MWACAAYAAYAHW

WDTRTTRTTGTWK
SELEX
Nitta et al.(2015)
fd59A_4
0.771 0.733
fd64A
M06197_2.00
Drosophila melanogaster
KVWAAACA

TGTTTWBM
B1H
Zhu et al.(2011)
fd64A_SANGER_5_FBgn0004895
0.766 0.663
FOXD4L4
M10564_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXD4L4_01
0.759 0.698
FOXD2
M03042_2.00
Homo sapiens
NRTMAAYRTTWDYN

NRHWAAYRTTKAYN
SELEX
Jolma et al.(2013)
FOXD2_1
0.755 0.698
FOXD2
M03043_2.00
Homo sapiens
RTAAAYA

TRTTTAY
SELEX
Jolma et al.(2013)
FOXD2_2
0.755 0.698
FOXD2
M04851_2.00
Homo sapiens
HWASAATAAYAWWN

NWWTRTTATTSTWD
SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_1
0.755 0.698
FOXD2
M04852_2.00
Homo sapiens
VYWANRTAAAYAH

DTRTTTAYNTWRB
SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_2
0.755 0.698
FOXD1
M02681_2.00
Homo sapiens
GTAAACAD

HTGTTTAC
SELEX
Mathelier et al.(2014)
MA0031.1
0.755 0.698
Foxd1
M10570_2.00
Mus musculus
SYWAWGTAAACADHVN

NBDHTGTTTACWTWRS
Transfac
Matys et al.(2006)
V$FREAC4_01
0.755 0.698
FOXD1
M10567_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FREAC4_02
0.755 0.698
FOXD2
M04853_2.00
Homo sapiens
HWACAATAACRWWN

NWWYGTTATTGTWD
SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_1
0.755 0.698
FOXD2
M04854_2.00
Homo sapiens
RYTRNGTMAACRD

HYGTTKACNYARY
SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_2
0.755 0.698
Gm5294
M01984_2.00
Mus musculus
NNKRTAAACANN

NNTGTTTAYMNN
PBM
Weirauch et al.(2014)
pTH3802
0.751 0.570
croc
M03744_2.00
Drosophila melanogaster
WRYGTMAACAH

DTGTTKACRYW
SELEX
Nitta et al.(2015)
croc_1
0.744 0.651
croc
M10571_2.00
Drosophila melanogaster
HWNARTAAATAKNNNV

BNNNMTATTTAYYNWD
Transfac
Matys et al.(2006)
I$CROC_01
0.744 0.651
FOXF1
M10529_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKHL5_Q3
0.736 0.628
FOXF1
M10530_2.00
Homo sapiens
YRHATAAACAHNB

VNDTGTTTATDYR
Transfac
Matys et al.(2006)
V$HFH8_01
0.736 0.628
FOXF2
M02680_2.00
Homo sapiens
BNHNSRTAAACAHN

NDTGTTTAYSNDNV
SELEX
Mathelier et al.(2014)
MA0030.1
0.736 0.628
FOXF2
M10548_2.00
Homo sapiens
BNHNBRTAAACAHNVN

NBNDTGTTTAYVNDNV
Transfac
Matys et al.(2006)
V$FREAC2_01
0.736 0.628
FOXL2
M04847_2.00
Homo sapiens
NVBGHMAACAH

DTGTTKDCVBN
SELEX
Yin et al.(2017)
FOXL2_FL_HT-SELEX
0.725 0.674
Foxl2
M09112_2.00
Mus musculus
DWDWRTAAACA

TGTTTAYWHWH
Misc
Kulakovskiy et al.(2013)
FOXL2_MOUSE.H11MO.0.C
0.725 0.674
FOXL2
M10560_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXL2_Q2
0.725 0.674
FOXL2
M10561_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXL2_Q5
0.725 0.674
FOXL2
M04848_2.00
Homo sapiens
HVCGWMAACAH

DTGTTKWCGBD
SELEX
Yin et al.(2017)
FOXL2_FL_Methyl-HT-SELEX
0.725 0.674
FOXI1
M03026_2.00
Homo sapiens
GTAAACA

TGTTTAC
SELEX
Jolma et al.(2013)
FOXI1_1
0.721 0.616
FOXI1
M03027_2.00
Homo sapiens
RTGTKTACGGTAAACAA

TTGTTTACCGTAMACAY
SELEX
Jolma et al.(2013)
FOXI1_2
0.721 0.616
FOXI1
M04827_2.00
Homo sapiens
NNNNNRTMAACAN

NTGTTKAYNNNNN
SELEX
Yin et al.(2017)
FOXI1_eDBD_HT-SELEX
0.721 0.616
FOXI1
M04829_2.00
Homo sapiens
AAYGTAAACAMW

WKTGTTTACRTT
SELEX
Yin et al.(2017)
FOXI1_FL_HT-SELEX
0.721 0.616
FOXI1
M09095_2.00
Homo sapiens
RRCCAATCAVAD

HTBTGATTGGYY
Misc
Kulakovskiy et al.(2013)
FOXI1_HUMAN.H11MO.0.B
0.721 0.616
Foxi1
M09109_2.00
Mus musculus
RRCCAATCAVAD

HTBTGATTGGYY
Misc
Kulakovskiy et al.(2013)
FOXI1_MOUSE.H11MO.0.B
0.721 0.616
FOXI1
M10556_2.00
Homo sapiens
HAWAYAAAYAHVH

DBDTRTTTRTWTD
Transfac
Matys et al.(2006)
V$HFH3_01
0.721 0.616
FOXI1
M04828_2.00
Homo sapiens
NWWVHRTAAACAH

DTGTTTAYDBWWN
SELEX
Yin et al.(2017)
FOXI1_eDBD_Methyl-HT-SELEX
0.721 0.616
FOXI1
M04830_2.00
Homo sapiens
AAYRTAAACAAW

WTTGTTTAYRTT
SELEX
Yin et al.(2017)
FOXI1_FL_Methyl-HT-SELEX
0.721 0.616
FOXG1
M01978_2.00
Homo sapiens
RTAAACAH

DTGTTTAY
PBM
Weirauch et al.(2014)
pTH5501
0.702 0.628
Foxg1
M00791_2.00
Mus musculus
NNNNMHAYAN

NTRTDKNNNN
PBM
Weirauch et al.(2013)
pTH2846
0.702 0.628
FOXG1
M03032_2.00
Homo sapiens
RTAAACAATDGTAAACA

TGTTTACHATTGTTTAY
SELEX
Jolma et al.(2013)
FOXG1_1
0.702 0.628
FOXG1
M03033_2.00
Homo sapiens
RCGGACACAATR

YATTGTGTCCGY
SELEX
Jolma et al.(2013)
FOXG1_2
0.702 0.628
Foxg1
M03052_2.00
Mus musculus
ATAAACAAVTGTMAACA

TGTTKACABTTGTTTAT
SELEX
Jolma et al.(2013)
Foxg1_1
0.702 0.628
Foxg1
M03053_2.00
Mus musculus
MHGGACACAATC

GATTGTGTCCDK
SELEX
Jolma et al.(2013)
Foxg1_2
0.702 0.628
Foxg1
M03054_2.00
Mus musculus
GTAAACA

TGTTTAC
SELEX
Jolma et al.(2013)
Foxg1_3
0.702 0.628
FOXG1
M04839_2.00
Homo sapiens
NACRYMMACAH

DTGTKKRYGTN
SELEX
Yin et al.(2017)
FOXG1_eDBD_HT-SELEX
0.702 0.628
FOXG1
M04840_2.00
Homo sapiens
HRCGYMAACAH

DTGTTKRCGYD
SELEX
Yin et al.(2017)
FOXG1_eDBD_Methyl-HT-SELEX
0.702 0.628
CBG14280
M01974_2.00
Caenorhabditis briggsae
RTAAACAN

NTGTTTAY
PBM
Weirauch et al.(2014)
pTH6734
0.698 0.628
slp1
M01986_2.00
Drosophila melanogaster
NRTAAACANN

NNTGTTTAYN
PBM
Weirauch et al.(2014)
pTH6549
0.698 0.628
slp1
M03736_2.00
Drosophila melanogaster
WDYRTAAACAWW

WWTGTTTAYRHW
SELEX
Nitta et al.(2015)
slp1_1
0.698 0.628
slp1
M03737_2.00
Drosophila melanogaster
RTRTAAACAAAYADH

DHTRTTTGTTTAYAY
SELEX
Nitta et al.(2015)
slp1_2
0.698 0.628
slp1
M06474_2.00
Drosophila melanogaster
WRBVWAAACAH

DTGTTTWBVYW
B1H
Mathelier et al.(2014)
MA0458.1
0.698 0.628
slp1
M06195_2.00
Drosophila melanogaster
WRBVWAAACAH

DTGTTTWBVYW
B1H
Zhu et al.(2011)
slp1_NAR_FBgn0003430
0.698 0.628
slp1
M09669_2.00
Drosophila melanogaster
ATGTMAACAMAVV

BBTKTGTTKACAT
Misc
Kulakovskiy et al.(2009)
slp1
0.698 0.628
bin
M03752_2.00
Drosophila melanogaster
HTAATGTAAACAAW

WTTGTTTACATTAD
SELEX
Nitta et al.(2015)
bin_1
0.697 0.500
bin
M06199_2.00
Drosophila melanogaster
TAAACARVGA

TCBYTGTTTA
B1H
Zhu et al.(2011)
bin_FlyReg_FBgn0045759
0.697 0.500
bin
M06200_2.00
Drosophila melanogaster
RTAAACA

TGTTTAY
B1H
Zhu et al.(2011)
bin_SANGER_5_FBgn0045759
0.697 0.500
foxg1a
M01985_2.00
Oryzias latipes
RTAAACAH

DTGTTTAY
PBM
Weirauch et al.(2014)
pTH6729
0.695 0.605
FOXK2
M08118_2.00
Homo sapiens
NNRTAAACANN

NNTGTTTAYNN
ChIP-seq
Mathelier et al.(2014)
MA1103.1
0.683 0.558
slp2
M03738_2.00
Drosophila melanogaster
NNTRTTTACAACAHN

NDTGTTGTAAAYANN
SELEX
Nitta et al.(2015)
slp2_1
0.668 0.640
slp2
M06196_2.00
Drosophila melanogaster
RTAAACAV

BTGTTTAY
B1H
Zhu et al.(2011)
slp2_SANGER_5_FBgn0004567
0.668 0.640
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSTRUP00000026948 Forkhead 53 142

Links

Other Forkhead family TFs
Other Takifugu rubripes TFs

1626 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
Smp_063030 Schistosoma mansoni Smp_063030 N 0.000
PXEA_0002775801 Protopolystoma xenopodis PXEA_0002775801 N 0.000
SCUD_0000069601 Schistosoma curassoni SCUD_0000069601 N 0.000
SMRZ_0000239101 Schistosoma margrebowiei SMRZ_0000239101 N 0.000
SMTD_0000250001 Schistosoma mattheei SMTD_0000250001 N 0.000
SROB_0000200001 Schistosoma rodhaini SROB_0000200001 N 0.000
SSLN_0001443801 Schistocephalus solidus SSLN_0001443801 N 0.000
T265_12755 Opisthorchis viverrini T265_12755 N 0.000
TASK_0000330801 Taenia asiatica TASK_0000330801 N 0.000
TRE_0000429101 Trichobilharzia regenti TRE_0000429101 N 0.000
TsM_000739800 Taenia solium TsM_000739800 N 0.000
MCOS_0000221201 Mesocestoides corti MCOS_0000221201 N 0.000
HNAJ_0001165601 Hymenolepis nana HNAJ_0001165601 N 0.000
SMU15014459 Schmidtea mediterranea SMU15014459 N 0.000
csin106338 Clonorchis sinensis csin106338 N 0.000
D915_04878 Fasciola hepatica D915_04878 N 0.000
D915_16004 Fasciola hepatica D915_16004 N 0.000
DILT_0000795401 Diphyllobothrium latum DILT_0000795401 N 0.000
ECANG7_04646 Echinococcus canadensis ECANG7_04646 N 0.000
ECPE_0000730301 Echinostoma caproni ECPE_0000730301 N 0.000
EmuJ_000909600 Echinococcus multilocularis EmuJ_000909600 N 0.000
HDID_0000023001 Hymenolepis diminuta HDID_0000023001 N 0.000
HmN_000710500 Hymenolepis microstoma HmN_000710500 N 0.000
TTAC_0000958301 Hydatigera taeniaeformis TTAC_0000958301 N 0.000