CHES-1-like (Drosophila melanogaster)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 FBgn0029504 T187404_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CHES-1-like
M01013_2.00
Drosophila melanogaster
NNNHHRMNNN

NNNKYDDNNN
PBM
Nakagawa et al.(2013)
CHES-1-like
(Direct) (Direct)
CHES-1-like
M03745_2.00
Drosophila melanogaster
DHRTAAACAAW

WTTGTTTAYDH
SELEX
Nitta et al.(2015)
CHES-1-like_1
(Direct) (Direct)
CHES-1-like
M03746_2.00
Drosophila melanogaster
GCGTCNNYRTAAACAAW

WTTGTTTAYRNNGACGC
SELEX
Nitta et al.(2015)
CHES-1-like_2
(Direct) (Direct)
CHES-1-like
M03747_2.00
Drosophila melanogaster
WNVGCGTCHWNGACGCNNW

WNNGCGTCNWDGACGCBNW
SELEX
Nitta et al.(2015)
CHES-1-like_3
(Direct) (Direct)
CHES-1-like
M03748_2.00
Drosophila melanogaster
DNGCGTCHNNDGACGCNN

NNGCGTCHNNDGACGCNH
SELEX
Nitta et al.(2015)
CHES-1-like_4
(Direct) (Direct)
CHES-1-like
M03749_2.00
Drosophila melanogaster
HNGCGTCHNGACGCNN

NNGCGTCNDGACGCND
SELEX
Nitta et al.(2015)
CHES-1-like_5
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
NEMVEDRAFT_v1g67209
M01016_2.00
Nematostella vectensis
NNDWHRMNNN

NNNKYDWHNN
PBM
Nakagawa et al.(2013)
FoxN2-3_Nvec
0.720 0.718
FOXN2
M01007_2.00
Homo sapiens
NNGACGCNN

NNGCGTCNN
PBM
Nakagawa et al.(2013)
FOXN2
0.691 0.718
FOXN2
M04835_2.00
Homo sapiens
NNGCGTSNNNNNSACGCNN

NNGCGTSNNNNNSACGCNN
SELEX
Yin et al.(2017)
FOXN2_eDBD_HT-SELEX
0.691 0.718
FOXN2
M04836_2.00
Homo sapiens
NGCATMRBNNYKATGCH

DGCATMRNNVYKATGCN
SELEX
Yin et al.(2017)
FOXN2_eDBD_Methyl-HT-SELEX
0.691 0.718
TriadG17577
M01018_2.00
Trichoplax adhaerens
NNNHHDNNNN

NNNNHDDNNN
PBM
Nakagawa et al.(2013)
FoxN2_3
0.688 0.682
FOXN3
M01227_2.00
Homo sapiens
GTAAACAA

TTGTTTAC
PBM
Lambert et al.(2019)
pTH11266
0.686 0.718
For this family, TFs with SR scores > 0.664 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01013_2.00 Forkhead 23 111

DNA Binding Domains

Protein ID Domain From To Sequence
FBpp0071036 Forkhead 700 788
FBpp0111859 Forkhead 700 788
FBpp0301970 Forkhead 700 788
FBpp0305405 Forkhead 700 788

Links

Other Forkhead family TFs
Other Drosophila melanogaster TFs

177 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
30005.m001261 Ricinus communis 30005.m001261 N 0.000
Aquca_108_00051 Aquilegia coerulea Aquca_108_00051 N 0.000
BGIOSGA014805 Oryza indica BGIOSGA014805 N 0.000
Bo1g147290 Brassica oleracea Bo1g147290 N 0.000
Bo3g061340 Brassica oleracea Bo3g061340 N 0.000
Bra001258 Brassica rapa Bra001258 N 0.000
Bra029658 Brassica rapa Bra029658 N 0.000
Bra040015 Brassica rapa Bra040015 N 0.000
cassava24109.valid.m1 Manihot esculenta cassava24109.valid.m1 N 0.000
Ciclev10016354m.g Citrus clementina Ciclev10016354m.g N 0.000
Cla012999 Citrullus lanatus Cla012999 N 0.000
F775_32546 Aegilops tauschii F775_32546 N 0.000
Gorai.004G060500 Gossypium raimondii Gorai.004G060500 N 0.000
Gorai.007G162200 Gossypium raimondii Gorai.007G162200 N 0.000
Gorai.N001000 Gossypium raimondii Gorai.N001000 N 0.000
GRMZM2G053557 Zea mays GRMZM2G053557 N 0.000
GSMUA_Achr3G19260_001 Musa acuminata GSMUA_Achr3G19260_001 N 0.000
GSMUA_Achr6G28720_001 Musa acuminata GSMUA_Achr6G28720_001 N 0.000
GSMUA_Achr9G08210_001 Musa acuminata GSMUA_Achr9G08210_001 N 0.000
LPERR04G13890 Leersia perrieri LPERR04G13890 N 0.000
Lus10025581.g Linum usitatissimum Lus10025581.g N 0.000
Lus10025582.g Linum usitatissimum Lus10025582.g N 0.000
Lus10027045.g Linum usitatissimum Lus10027045.g N 0.000
mgf025428m Mimulus guttatus mgf025428m N 0.000
OBART04G17310 Oryza barthii OBART04G17310 N 0.000
OGLUM04G17350 Oryza glumaepatula OGLUM04G17350 N 0.000
OLONG_009317 Oryza longistaminata OLONG_009317 N 0.000
OMERI04G14610 Oryza meridionalis OMERI04G14610 N 0.000
ONIVA04G15620 Oryza nivara ONIVA04G15620 N 0.000
OPUNC04G15120 Oryza punctata OPUNC04G15120 N 0.000
orange1.1g024388m.g Citrus sinensis orange1.1g024388m.g N 0.000
ORUFI04G18740 Oryza rufipogon ORUFI04G18740 N 0.000
Pavir.Ga01503 Panicum virgatum Pavir.Ga01503 N 0.000
Pavir.J08977 Panicum virgatum Pavir.J08977 N 0.000
PGSC0003DMG400020996 Solanum tuberosum PGSC0003DMG400020996 N 0.000
POPTR_0014s17210 Populus trichocarpa POPTR_0014s17210 N 0.000
Sb06g021360 Sorghum bicolor Sb06g021360 N 0.000
Si010917m.g Setaria italica Si010917m.g N 0.000
Solyc08g013980.2 Solanum lycopersicum Solyc08g013980.2 N 0.000
TCM_002550 Theobroma cacao TCM_002550 N 0.000
Thhalv10021333m.g Eutrema salsugineum Thhalv10021333m.g N 0.000
Traes_2AL_6990211D0 Triticum aestivum Traes_2AL_6990211D0 N 0.000
Traes_2BL_7B5109B55 Triticum aestivum Traes_2BL_7B5109B55 N 0.000
Traes_2DL_B72450387 Triticum aestivum Traes_2DL_B72450387 N 0.000