PPA26046 (Pristionchus pacificus)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00250 (Forkhead) IPR001766 PPA26046 T188383_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
slp2
M03738_2.00 		Drosophila melanogaster
NNTRTTTACAACAHN
NDTGTTGTAAAYANN		 SELEX
Nitta et al.(2015)
slp2_1 		0.739 0.605
slp2
M06196_2.00 		Drosophila melanogaster
RTAAACAV
BTGTTTAY		 B1H
Zhu et al.(2011)
slp2_SANGER_5_FBgn0004567 		0.739 0.605
CBG14280
M01974_2.00 		Caenorhabditis briggsae
RTAAACAN
NTGTTTAY		 PBM
Weirauch et al.(2014)
pTH6734 		0.735 0.593
FOXG1
M01978_2.00 		Homo sapiens
RTAAACAH
DTGTTTAY		 PBM
Weirauch et al.(2014)
pTH5501 		0.729 0.581
Foxg1
M00791_2.00 		Mus musculus
NNNNMHAYAN
NTRTDKNNNN		 PBM
Weirauch et al.(2013)
pTH2846 		0.729 0.581
FOXG1
M03032_2.00 		Homo sapiens
RTAAACAATDGTAAACA
TGTTTACHATTGTTTAY		 SELEX
Jolma et al.(2013)
FOXG1_1 		0.729 0.581
FOXG1
M03033_2.00 		Homo sapiens
RCGGACACAATR
YATTGTGTCCGY		 SELEX
Jolma et al.(2013)
FOXG1_2 		0.729 0.581
Foxg1
M03052_2.00 		Mus musculus
ATAAACAAVTGTMAACA
TGTTKACABTTGTTTAT		 SELEX
Jolma et al.(2013)
Foxg1_1 		0.729 0.581
Foxg1
M03053_2.00 		Mus musculus
MHGGACACAATC
GATTGTGTCCDK		 SELEX
Jolma et al.(2013)
Foxg1_2 		0.729 0.581
Foxg1
M03054_2.00 		Mus musculus
GTAAACA
TGTTTAC		 SELEX
Jolma et al.(2013)
Foxg1_3 		0.729 0.581
FOXG1
M04839_2.00 		Homo sapiens
NACRYMMACAH
DTGTKKRYGTN		 SELEX
Yin et al.(2017)
FOXG1_eDBD_HT-SELEX 		0.729 0.581
FOXG1
M04840_2.00 		Homo sapiens
HRCGYMAACAH
DTGTTKRCGYD		 SELEX
Yin et al.(2017)
FOXG1_eDBD_Methyl-HT-SELEX 		0.729 0.581
foxg1a
M01985_2.00 		Oryzias latipes
RTAAACAH
DTGTTTAY		 PBM
Weirauch et al.(2014)
pTH6729 		0.720 0.570
slp1
M01986_2.00 		Drosophila melanogaster
NRTAAACANN
NNTGTTTAYN		 PBM
Weirauch et al.(2014)
pTH6549 		0.719 0.535
slp1
M03736_2.00 		Drosophila melanogaster
WDYRTAAACAWW
WWTGTTTAYRHW		 SELEX
Nitta et al.(2015)
slp1_1 		0.719 0.535
slp1
M03737_2.00 		Drosophila melanogaster
RTRTAAACAAAYADH
DHTRTTTGTTTAYAY		 SELEX
Nitta et al.(2015)
slp1_2 		0.719 0.535
slp1
M06474_2.00 		Drosophila melanogaster
WRBVWAAACAH
DTGTTTWBVYW		 B1H
Mathelier et al.(2014)
MA0458.1 		0.719 0.535
slp1
M06195_2.00 		Drosophila melanogaster
WRBVWAAACAH
DTGTTTWBVYW		 B1H
Zhu et al.(2011)
slp1_NAR_FBgn0003430 		0.719 0.535
slp1
M09669_2.00 		Drosophila melanogaster
ATGTMAACAMAVV
BBTKTGTTKACAT		 Misc
Kulakovskiy et al.(2009)
slp1 		0.719 0.535
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PPA26046 Forkhead 138 228

Links

Other Forkhead family TFs
Other Pristionchus pacificus TFs

Invalid Input OrderBy

261 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action