CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPBR_00216
(
Sporothrix brasiliensis
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
SPBR_00216
T188583_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06173
M01992_2.00
Neurospora crassa
RTAAACAH
DTGTTTAY
PBM
Weirauch et al.(2014)
pTH8896
0.744
0.802
Foxj2
M01980_2.00
Mus musculus
RTAAACAN
NTGTTTAY
PBM
Weirauch et al.(2014)
pTH6638
0.681
0.547
HCM1
M00044_2.00
Saccharomyces cerevisiae
NRWHAACAN
NTGTTDWYN
PBM
Badis et al.(2008)
HCM1_2157
0.678
0.558
HCM1
M07473_2.00
Saccharomyces cerevisiae
VWMAACAH
DTGTTKWB
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0317.1
0.678
0.558
HCM1
M08554_2.00
Saccharomyces cerevisiae
VWMAACAH
DTGTTKWB
Misc
DeBoer et al.(2011)
YCR065W_570
0.678
0.558
Foxj2
M00790_2.00
Mus musculus
VHMAAYANN
NNTRTTKDB
PBM
Weirauch et al.(2013)
pTH3043
0.677
0.547
FOXJ2
M03016_2.00
Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ2_1
0.677
0.547
FOXJ2
M03017_2.00
Homo sapiens
RTAAACAH
DTGTTTAY
SELEX
Jolma et al.(2013)
FOXJ2_2
0.677
0.547
FOXJ2
M03018_2.00
Homo sapiens
GTAAACAWMAACA
TGTTKWTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ2_3
0.677
0.547
FOXJ2
M04809_2.00
Homo sapiens
NTRTTTACAAYANN
NNTRTTGTAAAYAN
SELEX
Yin et al.(2017)
FOXJ2_eDBD_HT-SELEX
0.677
0.547
FOXJ2
M09084_2.00
Homo sapiens
WARAYAAAYA
TRTTTRTYTW
Misc
Kulakovskiy et al.(2013)
FOXJ2_HUMAN.H11MO.0.C
0.677
0.547
Foxj2
M09100_2.00
Mus musculus
WARAYAAAYA
TRTTTRTYTW
Misc
Kulakovskiy et al.(2013)
FOXJ2_MOUSE.H11MO.0.C
0.677
0.547
FOXJ2
M10527_2.00
Homo sapiens
HHNHMRAYAAAYANHNND
HNNDNTRTTTRTYKDNDD
Transfac
Matys et al.(2006)
V$FOXJ2_01
0.677
0.547
FOXJ2
M10528_2.00
Homo sapiens
VYMAYAATATTTKN
NMAAATATTRTKRB
Transfac
Matys et al.(2006)
V$FOXJ2_02
0.677
0.547
FOXJ2
M04810_2.00
Homo sapiens
NTRTTTACAAYANN
NNTRTTGTAAAYAN
SELEX
Yin et al.(2017)
FOXJ2_eDBD_Methyl-HT-SELEX
0.677
0.547
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
KIH90147
Forkhead
231
320
KPGHSYATLIGMAILRSAGRKLTLSQIYKWISDTYSFYNPQDAGWQNSIRHNLSLNKAFVKQERPKDDPGKGNYWAIESGMEHLFMKDKT
Links
Other
Forkhead
family TFs
Other
Sporothrix brasiliensis
TFs
236 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy