CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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TriadG23008
(
Trichoplax adhaerens
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00250 (Forkhead)
IPR001766
TriadG23008
T188700_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxb1
M01983_2.00
Mus musculus
TRTTKAYWYW
WRWRTMAAYA
PBM
Weirauch et al.(2014)
pTH2808
0.741
0.779
FOXB1
M03028_2.00
Homo sapiens
GAATGACACRGCKV
BMGCYGTGTCATTC
SELEX
Jolma et al.(2013)
FOXB1_1
0.741
0.779
FOXB1
M03029_2.00
Homo sapiens
WRWGTMAATATTKACWYW
WRWGTMAATATTKACWYW
SELEX
Jolma et al.(2013)
FOXB1_2
0.741
0.779
FOXB1
M03030_2.00
Homo sapiens
WTRTTKACWTW
WAWGTMAAYAW
SELEX
Jolma et al.(2013)
FOXB1_3
0.741
0.779
FOXB1
M03031_2.00
Homo sapiens
NTRTTTACW
WGTAAAYAN
SELEX
Jolma et al.(2013)
FOXB1_4
0.741
0.779
FOXB1
M04837_2.00
Homo sapiens
NWRDGYMAATATTKRCWYWD
HWRWGYMAATATTKRCHYWN
SELEX
Yin et al.(2017)
FOXB1_eDBD_HT-SELEX
0.741
0.779
FOXB1
M04838_2.00
Homo sapiens
NWRNGYMAATATTKRCDYWD
HWRHGYMAATATTKRCNYWN
SELEX
Yin et al.(2017)
FOXB1_eDBD_Methyl-HT-SELEX
0.741
0.779
fd96Ca
M03743_2.00
Drosophila melanogaster
WRWGYMAATATTKRCWYW
WRWGYMAATATTKRCWYW
SELEX
Nitta et al.(2015)
fd96Ca_1
0.731
0.744
fkh
M03734_2.00
Drosophila melanogaster
WRWGYMAATATTKRCWYW
WRWGYMAATATTKRCWYW
SELEX
Nitta et al.(2015)
fkh_1
0.666
0.663
fkh
M03735_2.00
Drosophila melanogaster
HWASAATAAYAWT
AATRTTATTSTWD
SELEX
Nitta et al.(2015)
fkh_2
0.666
0.663
fkh
M06473_2.00
Drosophila melanogaster
NTRDDYAAACA
TGTTTRHHYAN
B1H
Mathelier et al.(2014)
MA0446.1
0.666
0.663
fkh
M06194_2.00
Drosophila melanogaster
NTRDDYAAACA
TGTTTRHHYAN
B1H
Zhu et al.(2011)
fkh_NAR_FBgn0000659
0.666
0.663
fkh
M08200_2.00
Drosophila melanogaster
NTRDDYAAACA
TGTTTRHHYAN
ChIP-seq
Contrino et al.(2012)
Mf15
0.666
0.663
fkh
M09668_2.00
Drosophila melanogaster
TRTTTRCAHAAG
CTTDTGYAAAYA
Misc
Kulakovskiy et al.(2009)
fkh
0.666
0.663
lin-31
M00665_2.00
Caenorhabditis elegans
NWRTAAAYANN
NNTRTTTAYWN
PBM
Narasimhan et al.(2015)
pTH9116
0.665
0.663
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
TriadP23008
Forkhead
13
102
KPPYSYITLTVMAIAASPQKMLQLSDIYKFITDNFPYYRENRQRWQNSLRHNLSFNDCFTRIPRQPGQSGKGGFWALHPDCNQMFENGSL
Links
Other
Forkhead
family TFs
Other
Trichoplax adhaerens
TFs
298 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy