CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Aan_R007110
(
Calypte anna
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
Aan_R007110
T188892_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXI1
M03026_2.00
Homo sapiens
GTAAACA
TGTTTAC
SELEX
Jolma et al.(2013)
FOXI1_1
0.773
0.919
FOXI1
M03027_2.00
Homo sapiens
RTGTKTACGGTAAACAA
TTGTTTACCGTAMACAY
SELEX
Jolma et al.(2013)
FOXI1_2
0.773
0.919
FOXI1
M04827_2.00
Homo sapiens
NNNNNRTMAACAN
NTGTTKAYNNNNN
SELEX
Yin et al.(2017)
FOXI1_eDBD_HT-SELEX
0.773
0.919
FOXI1
M04829_2.00
Homo sapiens
AAYGTAAACAMW
WKTGTTTACRTT
SELEX
Yin et al.(2017)
FOXI1_FL_HT-SELEX
0.773
0.919
FOXI1
M09095_2.00
Homo sapiens
RRCCAATCAVAD
HTBTGATTGGYY
Misc
Kulakovskiy et al.(2013)
FOXI1_HUMAN.H11MO.0.B
0.773
0.919
Foxi1
M09109_2.00
Mus musculus
RRCCAATCAVAD
HTBTGATTGGYY
Misc
Kulakovskiy et al.(2013)
FOXI1_MOUSE.H11MO.0.B
0.773
0.919
FOXI1
M10556_2.00
Homo sapiens
HAWAYAAAYAHVH
DBDTRTTTRTWTD
Transfac
Matys et al.(2006)
V$HFH3_01
0.773
0.919
FOXI1
M04828_2.00
Homo sapiens
NWWVHRTAAACAH
DTGTTTAYDBWWN
SELEX
Yin et al.(2017)
FOXI1_eDBD_Methyl-HT-SELEX
0.773
0.919
FOXI1
M04830_2.00
Homo sapiens
AAYRTAAACAAW
WTTGTTTAYRTT
SELEX
Yin et al.(2017)
FOXI1_FL_Methyl-HT-SELEX
0.773
0.919
Gm5294
M01984_2.00
Mus musculus
NNKRTAAACANN
NNTGTTTAYMNN
PBM
Weirauch et al.(2014)
pTH3802
0.715
0.616
slp1
M01986_2.00
Drosophila melanogaster
NRTAAACANN
NNTGTTTAYN
PBM
Weirauch et al.(2014)
pTH6549
0.712
0.628
slp1
M03736_2.00
Drosophila melanogaster
WDYRTAAACAWW
WWTGTTTAYRHW
SELEX
Nitta et al.(2015)
slp1_1
0.712
0.628
slp1
M03737_2.00
Drosophila melanogaster
RTRTAAACAAAYADH
DHTRTTTGTTTAYAY
SELEX
Nitta et al.(2015)
slp1_2
0.712
0.628
slp1
M06474_2.00
Drosophila melanogaster
WRBVWAAACAH
DTGTTTWBVYW
B1H
Mathelier et al.(2014)
MA0458.1
0.712
0.628
slp1
M06195_2.00
Drosophila melanogaster
WRBVWAAACAH
DTGTTTWBVYW
B1H
Zhu et al.(2011)
slp1_NAR_FBgn0003430
0.712
0.628
slp1
M09669_2.00
Drosophila melanogaster
ATGTMAACAMAVV
BBTKTGTTKACAT
Misc
Kulakovskiy et al.(2009)
slp1
0.712
0.628
CBG14280
M01974_2.00
Caenorhabditis briggsae
RTAAACAN
NTGTTTAY
PBM
Weirauch et al.(2014)
pTH6734
0.710
0.616
FOXE1
M04845_2.00
Homo sapiens
BVYTAWRYAAACADN
NHTGTTTRYWTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_HT-SELEX
0.707
0.663
FOXE1
M04846_2.00
Homo sapiens
BVYTAARYAAACAWH
DWTGTTTRYTTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_Methyl-HT-SELEX
0.707
0.663
FOXG1
M01978_2.00
Homo sapiens
RTAAACAH
DTGTTTAY
PBM
Weirauch et al.(2014)
pTH5501
0.700
0.605
Foxg1
M00791_2.00
Mus musculus
NNNNMHAYAN
NTRTDKNNNN
PBM
Weirauch et al.(2013)
pTH2846
0.700
0.605
FOXG1
M03032_2.00
Homo sapiens
RTAAACAATDGTAAACA
TGTTTACHATTGTTTAY
SELEX
Jolma et al.(2013)
FOXG1_1
0.700
0.605
FOXG1
M03033_2.00
Homo sapiens
RCGGACACAATR
YATTGTGTCCGY
SELEX
Jolma et al.(2013)
FOXG1_2
0.700
0.605
Foxg1
M03052_2.00
Mus musculus
ATAAACAAVTGTMAACA
TGTTKACABTTGTTTAT
SELEX
Jolma et al.(2013)
Foxg1_1
0.700
0.605
Foxg1
M03053_2.00
Mus musculus
MHGGACACAATC
GATTGTGTCCDK
SELEX
Jolma et al.(2013)
Foxg1_2
0.700
0.605
Foxg1
M03054_2.00
Mus musculus
GTAAACA
TGTTTAC
SELEX
Jolma et al.(2013)
Foxg1_3
0.700
0.605
FOXG1
M04839_2.00
Homo sapiens
NACRYMMACAH
DTGTKKRYGTN
SELEX
Yin et al.(2017)
FOXG1_eDBD_HT-SELEX
0.700
0.605
FOXG1
M04840_2.00
Homo sapiens
HRCGYMAACAH
DTGTTKRCGYD
SELEX
Yin et al.(2017)
FOXG1_eDBD_Methyl-HT-SELEX
0.700
0.605
FOXL1
M03034_2.00
Homo sapiens
RTAAACA
TGTTTAY
SELEX
Jolma et al.(2013)
FOXL1_1
0.699
0.674
FOXL1
M03035_2.00
Homo sapiens
NRTAAAYAAAYAN
NTRTTTRTTTAYN
SELEX
Jolma et al.(2013)
FOXL1_2
0.699
0.674
FOXL1
M10558_2.00
Homo sapiens
DHNVHATAAAYAHNNN
NNNDTRTTTATDBNDH
Transfac
Matys et al.(2006)
V$FREAC7_01
0.699
0.674
Foxl1
M00164_2.00
Mus musculus
NNNRTMAAYA
TRTTKAYNNN
PBM
Badis et al.(2009)
Foxl1_2809
0.699
0.663
FOXD4L4
M10564_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXD4L4_01
0.697
0.605
fd64A
M06197_2.00
Drosophila melanogaster
KVWAAACA
TGTTTWBM
B1H
Zhu et al.(2011)
fd64A_SANGER_5_FBgn0004895
0.695
0.616
fd59A
M03739_2.00
Drosophila melanogaster
HWAWRTAAACAWW
WWTGTTTAYWTWD
SELEX
Nitta et al.(2015)
fd59A_1
0.694
0.628
fd59A
M03740_2.00
Drosophila melanogaster
WWAVAATAACAHN
NDTGTTATTBTWW
SELEX
Nitta et al.(2015)
fd59A_2
0.694
0.628
fd59A
M03741_2.00
Drosophila melanogaster
YWRWRTAAAYAHH
DDTRTTTAYWYWR
SELEX
Nitta et al.(2015)
fd59A_3
0.694
0.628
fd59A
M03742_2.00
Drosophila melanogaster
MWACAAYAAYAHW
WDTRTTRTTGTWK
SELEX
Nitta et al.(2015)
fd59A_4
0.694
0.628
FOXF2
M02680_2.00
Homo sapiens
BNHNSRTAAACAHN
NDTGTTTAYSNDNV
SELEX
Mathelier et al.(2014)
MA0030.1
0.694
0.593
FOXF2
M10548_2.00
Homo sapiens
BNHNBRTAAACAHNVN
NBNDTGTTTAYVNDNV
Transfac
Matys et al.(2006)
V$FREAC2_01
0.694
0.593
foxg1a
M01985_2.00
Oryzias latipes
RTAAACAH
DTGTTTAY
PBM
Weirauch et al.(2014)
pTH6729
0.694
0.593
FOXD2
M03042_2.00
Homo sapiens
NRTMAAYRTTWDYN
NRHWAAYRTTKAYN
SELEX
Jolma et al.(2013)
FOXD2_1
0.693
0.616
FOXD2
M03043_2.00
Homo sapiens
RTAAAYA
TRTTTAY
SELEX
Jolma et al.(2013)
FOXD2_2
0.693
0.616
FOXD2
M04851_2.00
Homo sapiens
HWASAATAAYAWWN
NWWTRTTATTSTWD
SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_1
0.693
0.616
FOXD2
M04852_2.00
Homo sapiens
VYWANRTAAAYAH
DTRTTTAYNTWRB
SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_2
0.693
0.616
FOXD1
M02681_2.00
Homo sapiens
GTAAACAD
HTGTTTAC
SELEX
Mathelier et al.(2014)
MA0031.1
0.693
0.616
Foxd1
M10570_2.00
Mus musculus
SYWAWGTAAACADHVN
NBDHTGTTTACWTWRS
Transfac
Matys et al.(2006)
V$FREAC4_01
0.693
0.616
FOXD1
M10567_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FREAC4_02
0.693
0.616
FOXD2
M04853_2.00
Homo sapiens
HWACAATAACRWWN
NWWYGTTATTGTWD
SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_1
0.693
0.616
FOXD2
M04854_2.00
Homo sapiens
RYTRNGTMAACRD
HYGTTKACNYARY
SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_2
0.693
0.616
foxe3
M01228_2.00
Xenopus tropicalis
WNNVHHMAYW
WRTKDDBNNW
PBM
Lambert et al.(2019)
pTH9824
0.692
0.651
FOXD3
M03044_2.00
Homo sapiens
NRTMAAYRTTWDYN
NRHWAAYRTTKAYN
SELEX
Jolma et al.(2013)
FOXD3_1
0.686
0.616
FOXD3
M03045_2.00
Homo sapiens
RTAAAYA
TRTTTAY
SELEX
Jolma et al.(2013)
FOXD3_2
0.686
0.616
FOXD3
M04855_2.00
Homo sapiens
VHWRHRTAMACW
WGTKTAYDYWDB
SELEX
Yin et al.(2017)
FOXD3_eDBD_HT-SELEX
0.686
0.616
Foxd3
M09114_2.00
Mus musculus
DVNWRDRNAAACAVN
NBTGTTTNYHYWNBH
Misc
Kulakovskiy et al.(2013)
FOXD3_MOUSE.H11MO.0.C
0.686
0.616
FOXD3
M10565_2.00
Homo sapiens
RADHAAAYAWWH
DWWTRTTTDHTY
Transfac
Matys et al.(2006)
V$FOXD3_01
0.686
0.616
FOXD3
M10566_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HFH2_Q5
0.686
0.616
FOXD3
M04856_2.00
Homo sapiens
VYWRHRTAAACW
WGTTTAYDYWRB
SELEX
Yin et al.(2017)
FOXD3_eDBD_Methyl-HT-SELEX
0.686
0.616
FOXF1
M10529_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKHL5_Q3
0.686
0.605
FOXF1
M10530_2.00
Homo sapiens
YRHATAAACAHNB
VNDTGTTTATDYR
Transfac
Matys et al.(2006)
V$HFH8_01
0.686
0.605
Foxj2
M01980_2.00
Mus musculus
RTAAACAN
NTGTTTAY
PBM
Weirauch et al.(2014)
pTH6638
0.682
0.547
slp2
M03738_2.00
Drosophila melanogaster
NNTRTTTACAACAHN
NDTGTTGTAAAYANN
SELEX
Nitta et al.(2015)
slp2_1
0.679
0.616
slp2
M06196_2.00
Drosophila melanogaster
RTAAACAV
BTGTTTAY
B1H
Zhu et al.(2011)
slp2_SANGER_5_FBgn0004567
0.679
0.616
Foxj2
M00790_2.00
Mus musculus
VHMAAYANN
NNTRTTKDB
PBM
Weirauch et al.(2013)
pTH3043
0.678
0.547
FOXJ2
M03016_2.00
Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ2_1
0.678
0.547
FOXJ2
M03017_2.00
Homo sapiens
RTAAACAH
DTGTTTAY
SELEX
Jolma et al.(2013)
FOXJ2_2
0.678
0.547
FOXJ2
M03018_2.00
Homo sapiens
GTAAACAWMAACA
TGTTKWTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ2_3
0.678
0.547
FOXJ2
M04809_2.00
Homo sapiens
NTRTTTACAAYANN
NNTRTTGTAAAYAN
SELEX
Yin et al.(2017)
FOXJ2_eDBD_HT-SELEX
0.678
0.547
FOXJ2
M09084_2.00
Homo sapiens
WARAYAAAYA
TRTTTRTYTW
Misc
Kulakovskiy et al.(2013)
FOXJ2_HUMAN.H11MO.0.C
0.678
0.547
Foxj2
M09100_2.00
Mus musculus
WARAYAAAYA
TRTTTRTYTW
Misc
Kulakovskiy et al.(2013)
FOXJ2_MOUSE.H11MO.0.C
0.678
0.547
FOXJ2
M10527_2.00
Homo sapiens
HHNHMRAYAAAYANHNND
HNNDNTRTTTRTYKDNDD
Transfac
Matys et al.(2006)
V$FOXJ2_01
0.678
0.547
FOXJ2
M10528_2.00
Homo sapiens
VYMAYAATATTTKN
NMAAATATTRTKRB
Transfac
Matys et al.(2006)
V$FOXJ2_02
0.678
0.547
FOXJ2
M04810_2.00
Homo sapiens
NTRTTTACAAYANN
NNTRTTGTAAAYAN
SELEX
Yin et al.(2017)
FOXJ2_eDBD_Methyl-HT-SELEX
0.678
0.547
FOXL2
M04847_2.00
Homo sapiens
NVBGHMAACAH
DTGTTKDCVBN
SELEX
Yin et al.(2017)
FOXL2_FL_HT-SELEX
0.667
0.686
Foxl2
M09112_2.00
Mus musculus
DWDWRTAAACA
TGTTTAYWHWH
Misc
Kulakovskiy et al.(2013)
FOXL2_MOUSE.H11MO.0.C
0.667
0.686
FOXL2
M10560_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXL2_Q2
0.667
0.686
FOXL2
M10561_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXL2_Q5
0.667
0.686
FOXL2
M04848_2.00
Homo sapiens
HVCGWMAACAH
DTGTTKWCGBD
SELEX
Yin et al.(2017)
FOXL2_FL_Methyl-HT-SELEX
0.667
0.686
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Aan_R007110
Forkhead
1
90
RPPYSYSALIAMAIHSAPGRRRTLSQIYQYVAENFPFYKKSKAGWQNSIRHNLSLNDCFKKVPRDEGDPGKGNYWTLDPNCEKMFDNGNF
Links
Other
Forkhead
family TFs
Other
Calypte anna
TFs
1263 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy