|
ENSBTAP00000004805-D1
(Bos grunniens)
Forkhead
|
TF Information |
Pfam ID |
Interpro ID |
Gene ID |
CIS-BP ID |
Sequence source |
PF00250 (Forkhead) |
IPR001766 |
ENSBTAP00000004805-D1 |
T189027_2.00 |
GigaDB (2015-Oct-22) |
NCBI Gene Info:This gene encodes a tumor suppressor protein containing transcriptional activation, DNA binding, and oligomerization domains. The encoded protein responds to diverse cellular stresses to regulate expression of target genes, thereby inducing cell cycle arrest, apoptosis, senescence, DNA repair, or changes in metabolism. Mutations in this gene are associated with a variety of human cancers, including hereditary cancers such as Li-Fraumeni syndrome. Alternative splicing of this gene and the use of alternate promoters result in multiple transcript variants and isoforms. Additional isoforms have also been shown to result from the use of alternate translation initiation codons from identical transcript variants (PMIDs: 12032546, 20937277). [provided by RefSeq, Dec 2016] |
Directly determined binding motifs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
No direct experiments |
|
|
|
|
|
Motifs from related TFs |
Name/Motif ID |
Species |
Forward |
Reverse |
Type/Study/Study ID |
SR Score |
DBD Identity |
FOXK2
M08118_2.00 |
Homo sapiens |
NNRTAAACANN |
NNTGTTTAYNN |
ChIP-seq
Mathelier et al.(2014)
MA1103.1
|
0.869
|
1.000
|
Foxk1
M00163_2.00 |
Mus musculus |
RWMAACAA |
TTGTTKWY |
PBM
Badis et al.(2009)
Foxk1_2323
|
0.828
|
0.895
|
Foxk1
M03061_2.00 |
Mus musculus |
CGGACACAATC |
GATTGTGTCCG |
SELEX
Jolma et al.(2013)
Foxk1_1
|
0.828
|
0.895
|
Foxk1
M03062_2.00 |
Mus musculus |
RTAAACA |
TGTTTAY |
SELEX
Jolma et al.(2013)
Foxk1_2
|
0.828
|
0.895
|
Foxk1
M09113_2.00 |
Mus musculus |
NNGDMAACAVV |
BBTGTTKHCNN |
Misc
Kulakovskiy et al.(2013)
FOXK1_MOUSE.H11MO.0.A
|
0.828
|
0.895
|
FOXK1
M01977_2.00 |
Homo sapiens |
NNRWMMAYAN |
NTRTKKWYNN |
PBM
Weirauch et al.(2014)
pTH6108
|
0.828
|
0.884
|
FOXK1
M03025_2.00 |
Homo sapiens |
CGGACACAAT |
ATTGTGTCCG |
SELEX
Jolma et al.(2013)
FOXK1_1
|
0.828
|
0.884
|
FOXK1
M04825_2.00 |
Homo sapiens |
NDNRTMAAYAN |
NTRTTKAYNHN |
SELEX
Yin et al.(2017)
FOXK1_eDBD_HT-SELEX
|
0.828
|
0.884
|
FOXK1
M08120_2.00 |
Homo sapiens |
NNNGTAAACANVNN |
NNBNTGTTTACNNN |
ChIP-seq
Mathelier et al.(2014)
MA0852.2
|
0.828
|
0.884
|
FOXK1
M09094_2.00 |
Homo sapiens |
VNDRDAAACA |
TGTTTHYHNB |
Misc
Kulakovskiy et al.(2013)
FOXK1_HUMAN.H11MO.0.A
|
0.828
|
0.884
|
FOXK1
M04826_2.00 |
Homo sapiens |
NWYRYAAWYAD |
HTRWTTRYRWN |
SELEX
Yin et al.(2017)
FOXK1_eDBD_Methyl-HT-SELEX
|
0.828
|
0.884
|
SPU_025010
M01988_2.00 |
Strongylocentrotus purpuratus |
NNVNHHAYAN |
NTRTDDNBNN |
PBM
Weirauch et al.(2014)
pTH6641
|
0.817
|
0.872
|
FOXI1
M03026_2.00 |
Homo sapiens |
GTAAACA |
TGTTTAC |
SELEX
Jolma et al.(2013)
FOXI1_1
|
0.728
|
0.547
|
FOXI1
M03027_2.00 |
Homo sapiens |
RTGTKTACGGTAAACAA |
TTGTTTACCGTAMACAY |
SELEX
Jolma et al.(2013)
FOXI1_2
|
0.728
|
0.547
|
FOXI1
M04827_2.00 |
Homo sapiens |
NNNNNRTMAACAN |
NTGTTKAYNNNNN |
SELEX
Yin et al.(2017)
FOXI1_eDBD_HT-SELEX
|
0.728
|
0.547
|
FOXI1
M04829_2.00 |
Homo sapiens |
AAYGTAAACAMW |
WKTGTTTACRTT |
SELEX
Yin et al.(2017)
FOXI1_FL_HT-SELEX
|
0.728
|
0.547
|
FOXI1
M09095_2.00 |
Homo sapiens |
RRCCAATCAVAD |
HTBTGATTGGYY |
Misc
Kulakovskiy et al.(2013)
FOXI1_HUMAN.H11MO.0.B
|
0.728
|
0.547
|
FOXI1
M10556_2.00 |
Homo sapiens |
HAWAYAAAYAHVH |
DBDTRTTTRTWTD |
Transfac
Matys et al.(2006)
V$HFH3_01
|
0.728
|
0.547
|
FOXI1
M04828_2.00 |
Homo sapiens |
NWWVHRTAAACAH |
DTGTTTAYDBWWN |
SELEX
Yin et al.(2017)
FOXI1_eDBD_Methyl-HT-SELEX
|
0.728
|
0.547
|
FOXI1
M04830_2.00 |
Homo sapiens |
AAYRTAAACAAW |
WTTGTTTAYRTT |
SELEX
Yin et al.(2017)
FOXI1_FL_Methyl-HT-SELEX
|
0.728
|
0.547
|
Foxi1
M09109_2.00 |
Mus musculus |
RRCCAATCAVAD |
HTBTGATTGGYY |
Misc
Kulakovskiy et al.(2013)
FOXI1_MOUSE.H11MO.0.B
|
0.728
|
0.535
|
FOXJ3
M03046_2.00 |
Homo sapiens |
RTAAAVAA |
TTBTTTAY |
SELEX
Jolma et al.(2013)
FOXJ3_1
|
0.708
|
0.581
|
FOXJ3
M03047_2.00 |
Homo sapiens |
GTAAACARTMAACA |
TGTTKAYTGTTTAC |
SELEX
Jolma et al.(2013)
FOXJ3_2
|
0.708
|
0.581
|
FOXJ3
M03048_2.00 |
Homo sapiens |
GTAAACATAAACA |
TGTTTATGTTTAC |
SELEX
Jolma et al.(2013)
FOXJ3_3
|
0.708
|
0.581
|
FOXJ3
M02736_2.00 |
Homo sapiens |
AAACAATAAACA |
TGTTTATTGTTT |
SELEX
Jolma et al.(2010)
FOXJ3_dimer
|
0.708
|
0.581
|
FOXJ3
M02737_2.00 |
Homo sapiens |
RTAAACAW |
WTGTTTAY |
SELEX
Jolma et al.(2010)
FOXJ3_monomer
|
0.708
|
0.581
|
FOXJ3
M04859_2.00 |
Homo sapiens |
DYGTMAACAH |
DTGTTKACRH |
SELEX
Yin et al.(2017)
FOXJ3_eDBD_HT-SELEX
|
0.708
|
0.581
|
FOXJ3
M09098_2.00 |
Homo sapiens |
WAAMMATAAACAN |
NTGTTTATKKTTW |
Misc
Kulakovskiy et al.(2013)
FOXJ3_HUMAN.H11MO.0.A
|
0.708
|
0.581
|
FOXJ3
M04860_2.00 |
Homo sapiens |
RYGTMAACAH |
DTGTTKACRY |
SELEX
Yin et al.(2017)
FOXJ3_eDBD_Methyl-HT-SELEX
|
0.708
|
0.581
|
SPU_007644
M01987_2.00 |
Strongylocentrotus purpuratus |
NNHHAYDNN |
NNHRTDDNN |
PBM
Weirauch et al.(2014)
pTH6497
|
0.707
|
0.581
|
Foxj3
M00160_2.00 |
Mus musculus |
NRTAAACAHN |
NDTGTTTAYN |
PBM
Badis et al.(2009)
Foxj3_0982
|
0.706
|
0.581
|
Foxj3
M01981_2.00 |
Mus musculus |
VNHHAYANN |
NNTRTDDNB |
PBM
Weirauch et al.(2014)
pTH6591
|
0.706
|
0.581
|
Foxj3
M03055_2.00 |
Mus musculus |
ACGGACACAAT |
ATTGTGTCCGT |
SELEX
Jolma et al.(2013)
Foxj3_1
|
0.706
|
0.581
|
Foxj3
M03056_2.00 |
Mus musculus |
GTAAACARTMAACA |
TGTTKAYTGTTTAC |
SELEX
Jolma et al.(2013)
Foxj3_2
|
0.706
|
0.581
|
Foxj3
M03057_2.00 |
Mus musculus |
RTAAACAW |
WTGTTTAY |
SELEX
Jolma et al.(2013)
Foxj3_3
|
0.706
|
0.581
|
Foxj3
M03058_2.00 |
Mus musculus |
RTAAACAWAAACA |
TGTTTWTGTTTAY |
SELEX
Jolma et al.(2013)
Foxj3_4
|
0.706
|
0.581
|
Foxj3
M09102_2.00 |
Mus musculus |
WAAMMATAAACAN |
NTGTTTATKKTTW |
Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A
|
0.706
|
0.581
|
FOXC1
M00257_2.00 |
Homo sapiens |
NNNVHHAAYA |
TRTTDDBNNN |
PBM
Barrera et al.(2016)
FOXC1_REF
|
0.700
|
0.593
|
Foxc1
M01982_2.00 |
Mus musculus |
HNNRHMAAYA |
TRTTKDYNND |
PBM
Weirauch et al.(2014)
pTH2673
|
0.700
|
0.593
|
FOXC1
M03013_2.00 |
Homo sapiens |
AWRTAAAYAAAYA |
TRTTTRTTTAYWT |
SELEX
Jolma et al.(2013)
FOXC1_1
|
0.700
|
0.593
|
FOXC1
M03014_2.00 |
Homo sapiens |
NRWMAATATTKWYN |
NRWMAATATTKWYN |
SELEX
Jolma et al.(2013)
FOXC1_2
|
0.700
|
0.593
|
FOXC1
M03015_2.00 |
Homo sapiens |
WRWRTMAAYAW |
WTRTTKAYWYW |
SELEX
Jolma et al.(2013)
FOXC1_3
|
0.700
|
0.593
|
Foxc1
M03059_2.00 |
Mus musculus |
RTAAAYAAACA |
TGTTTRTTTAY |
SELEX
Jolma et al.(2013)
Foxc1_1
|
0.700
|
0.593
|
Foxc1
M03060_2.00 |
Mus musculus |
RTAAACA |
TGTTTAY |
SELEX
Jolma et al.(2013)
Foxc1_2
|
0.700
|
0.593
|
FOXC1
M09083_2.00 |
Homo sapiens |
SBWAWRTAAACADHN |
NDHTGTTTAYWTWVS |
Misc
Kulakovskiy et al.(2013)
FOXC1_HUMAN.H11MO.0.C
|
0.700
|
0.593
|
Foxc1
M09111_2.00 |
Mus musculus |
SBWAWRTAAACADHN |
NDHTGTTTAYWTWVS |
Misc
Kulakovskiy et al.(2013)
FOXC1_MOUSE.H11MO.0.C
|
0.700
|
0.593
|
FOXC1
M10525_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$FOXC1_Q4
|
0.700
|
0.593
|
FOXC1
M10526_2.00 |
Homo sapiens |
TSTTTATTTACDBNVN |
NBNVHGTAAATAAASA |
Transfac
Matys et al.(2006)
V$FREAC3_01
|
0.700
|
0.593
|
FOXC1
M00253_2.00 |
Homo sapiens |
NNHATAAWHAN |
NTDWTTATDNN |
PBM
Barrera et al.(2016)
FOXC1_F112S
|
0.700
|
0.593
|
FOXC1
M00255_2.00 |
Homo sapiens |
NRTATATWHNNN |
NNNDWATATAYN |
PBM
Barrera et al.(2016)
FOXC1_L130F
|
0.700
|
0.581
|
FOXC1
M00256_2.00 |
Homo sapiens |
NNNNWWTYAMAWN |
NWTKTRAWWNNNN |
PBM
Barrera et al.(2016)
FOXC1_P79L
|
0.700
|
0.581
|
FOXC1
M00258_2.00 |
Homo sapiens |
NNNAMAAYANN |
NNTRTTKTNNN |
PBM
Barrera et al.(2016)
FOXC1_S131L
|
0.700
|
0.581
|
FOXC1
M00259_2.00 |
Homo sapiens |
RTAAACAW |
WTGTTTAY |
PBM
Barrera et al.(2016)
FOXC1_S82T
|
0.700
|
0.581
|
Foxj2
M01980_2.00 |
Mus musculus |
RTAAACAN |
NTGTTTAY |
PBM
Weirauch et al.(2014)
pTH6638
|
0.688
|
0.547
|
Foxj2
M00790_2.00 |
Mus musculus |
VHMAAYANN |
NNTRTTKDB |
PBM
Weirauch et al.(2013)
pTH3043
|
0.684
|
0.558
|
FOXJ2
M03016_2.00 |
Homo sapiens |
GTAAACARTMAACA |
TGTTKAYTGTTTAC |
SELEX
Jolma et al.(2013)
FOXJ2_1
|
0.684
|
0.558
|
FOXJ2
M03017_2.00 |
Homo sapiens |
RTAAACAH |
DTGTTTAY |
SELEX
Jolma et al.(2013)
FOXJ2_2
|
0.684
|
0.558
|
FOXJ2
M03018_2.00 |
Homo sapiens |
GTAAACAWMAACA |
TGTTKWTGTTTAC |
SELEX
Jolma et al.(2013)
FOXJ2_3
|
0.684
|
0.558
|
FOXJ2
M04809_2.00 |
Homo sapiens |
NTRTTTACAAYANN |
NNTRTTGTAAAYAN |
SELEX
Yin et al.(2017)
FOXJ2_eDBD_HT-SELEX
|
0.684
|
0.558
|
FOXJ2
M09084_2.00 |
Homo sapiens |
WARAYAAAYA |
TRTTTRTYTW |
Misc
Kulakovskiy et al.(2013)
FOXJ2_HUMAN.H11MO.0.C
|
0.684
|
0.558
|
Foxj2
M09100_2.00 |
Mus musculus |
WARAYAAAYA |
TRTTTRTYTW |
Misc
Kulakovskiy et al.(2013)
FOXJ2_MOUSE.H11MO.0.C
|
0.684
|
0.558
|
FOXJ2
M10527_2.00 |
Homo sapiens |
HHNHMRAYAAAYANHNND |
HNNDNTRTTTRTYKDNDD |
Transfac
Matys et al.(2006)
V$FOXJ2_01
|
0.684
|
0.558
|
FOXJ2
M10528_2.00 |
Homo sapiens |
VYMAYAATATTTKN |
NMAAATATTRTKRB |
Transfac
Matys et al.(2006)
V$FOXJ2_02
|
0.684
|
0.558
|
FOXJ2
M04810_2.00 |
Homo sapiens |
NTRTTTACAAYANN |
NNTRTTGTAAAYAN |
SELEX
Yin et al.(2017)
FOXJ2_eDBD_Methyl-HT-SELEX
|
0.684
|
0.558
|
FOXC1
M00254_2.00 |
Homo sapiens |
RRTAAACANN |
NNTGTTTAYY |
PBM
Barrera et al.(2016)
FOXC1_I126M
|
0.675
|
0.581
|
FOXG1
M01978_2.00 |
Homo sapiens |
RTAAACAH |
DTGTTTAY |
PBM
Weirauch et al.(2014)
pTH5501
|
0.672
|
0.605
|
Foxg1
M00791_2.00 |
Mus musculus |
NNNNMHAYAN |
NTRTDKNNNN |
PBM
Weirauch et al.(2013)
pTH2846
|
0.672
|
0.605
|
FOXG1
M03032_2.00 |
Homo sapiens |
RTAAACAATDGTAAACA |
TGTTTACHATTGTTTAY |
SELEX
Jolma et al.(2013)
FOXG1_1
|
0.672
|
0.605
|
FOXG1
M03033_2.00 |
Homo sapiens |
RCGGACACAATR |
YATTGTGTCCGY |
SELEX
Jolma et al.(2013)
FOXG1_2
|
0.672
|
0.605
|
Foxg1
M03052_2.00 |
Mus musculus |
ATAAACAAVTGTMAACA |
TGTTKACABTTGTTTAT |
SELEX
Jolma et al.(2013)
Foxg1_1
|
0.672
|
0.605
|
Foxg1
M03053_2.00 |
Mus musculus |
MHGGACACAATC |
GATTGTGTCCDK |
SELEX
Jolma et al.(2013)
Foxg1_2
|
0.672
|
0.605
|
Foxg1
M03054_2.00 |
Mus musculus |
GTAAACA |
TGTTTAC |
SELEX
Jolma et al.(2013)
Foxg1_3
|
0.672
|
0.605
|
FOXG1
M04839_2.00 |
Homo sapiens |
NACRYMMACAH |
DTGTKKRYGTN |
SELEX
Yin et al.(2017)
FOXG1_eDBD_HT-SELEX
|
0.672
|
0.605
|
FOXG1
M04840_2.00 |
Homo sapiens |
HRCGYMAACAH |
DTGTTKRCGYD |
SELEX
Yin et al.(2017)
FOXG1_eDBD_Methyl-HT-SELEX
|
0.672
|
0.605
|
foxg1a
M01985_2.00 |
Oryzias latipes |
RTAAACAH |
DTGTTTAY |
PBM
Weirauch et al.(2014)
pTH6729
|
0.670
|
0.581
|
slp1
M01986_2.00 |
Drosophila melanogaster |
NRTAAACANN |
NNTGTTTAYN |
PBM
Weirauch et al.(2014)
pTH6549
|
0.670
|
0.547
|
slp1
M03736_2.00 |
Drosophila melanogaster |
WDYRTAAACAWW |
WWTGTTTAYRHW |
SELEX
Nitta et al.(2015)
slp1_1
|
0.670
|
0.547
|
slp1
M03737_2.00 |
Drosophila melanogaster |
RTRTAAACAAAYADH |
DHTRTTTGTTTAYAY |
SELEX
Nitta et al.(2015)
slp1_2
|
0.670
|
0.547
|
slp1
M06474_2.00 |
Drosophila melanogaster |
WRBVWAAACAH |
DTGTTTWBVYW |
B1H
Mathelier et al.(2014)
MA0458.1
|
0.670
|
0.547
|
slp1
M06195_2.00 |
Drosophila melanogaster |
WRBVWAAACAH |
DTGTTTWBVYW |
B1H
Zhu et al.(2011)
slp1_NAR_FBgn0003430
|
0.670
|
0.547
|
slp1
M09669_2.00 |
Drosophila melanogaster |
ATGTMAACAMAVV |
BBTKTGTTKACAT |
Misc
Kulakovskiy et al.(2009)
slp1
|
0.670
|
0.547
|
CBG14280
M01974_2.00 |
Caenorhabditis briggsae |
RTAAACAN |
NTGTTTAY |
PBM
Weirauch et al.(2014)
pTH6734
|
0.669
|
0.558
|
Foxc2
M00796_2.00 |
Mus musculus |
HNNRHMAAYA |
TRTTKDYNND |
PBM
Weirauch et al.(2013)
pTH3796
|
0.667
|
0.581
|
FOXC2
M03036_2.00 |
Homo sapiens |
NRTMAATATTDWYN |
NRWHAATATTKAYN |
SELEX
Jolma et al.(2013)
FOXC2_1
|
0.667
|
0.581
|
FOXC2
M03037_2.00 |
Homo sapiens |
RTAAAYAAACA |
TGTTTRTTTAY |
SELEX
Jolma et al.(2013)
FOXC2_2
|
0.667
|
0.581
|
FOXC2
M03038_2.00 |
Homo sapiens |
WAHRTMAAYAWW |
WWTRTTKAYDTW |
SELEX
Jolma et al.(2013)
FOXC2_3
|
0.667
|
0.581
|
FOXC2
M04841_2.00 |
Homo sapiens |
NHVNRYMAACAH |
DTGTTKRYNBDN |
SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_1
|
0.667
|
0.581
|
FOXC2
M04842_2.00 |
Homo sapiens |
RHAMAYAAACAH |
DTGTTTRTKTDY |
SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_2
|
0.667
|
0.581
|
FOXC2
M10559_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$FKHL14_Q2
|
0.667
|
0.581
|
FOXC2
M04843_2.00 |
Homo sapiens |
NHNNRYMAACAN |
NTGTTKRYNNDN |
SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_1
|
0.667
|
0.581
|
FOXC2
M04844_2.00 |
Homo sapiens |
VHMMAYAAACAN |
NTGTTTRTKKDB |
SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_2
|
0.667
|
0.581
|
FOXP1
M00836_2.00 |
Homo sapiens |
NRTMAACANN |
NNTGTTKAYN |
PBM
Gabut et al.(2011)
pEX0123
|
0.665
|
0.419
|
FOXP1
M00837_2.00 |
Homo sapiens |
DGTAAACAA |
TTGTTTACH |
PBM
Gabut et al.(2011)
pEX0124
|
0.665
|
0.419
|
FOXP1
M01976_2.00 |
Homo sapiens |
RTAAACAA |
TTGTTTAY |
PBM
Weirauch et al.(2014)
pTH5656
|
0.665
|
0.419
|
Foxp1
M00793_2.00 |
Mus musculus |
NRTMAAYAN |
NTRTTKAYN |
PBM
Weirauch et al.(2013)
pTH3855
|
0.665
|
0.419
|
FOXP1
M04811_2.00 |
Homo sapiens |
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN |
NTGTTKWBYRTNVNNNNNNAYNRYAAACAN |
SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX
|
0.665
|
0.419
|
FOXP1
M08115_2.00 |
Homo sapiens |
NDGTAAACAVNN |
NNBTGTTTACHN |
ChIP-seq
Mathelier et al.(2014)
MA0481.2
|
0.665
|
0.419
|
FOXP1
M09086_2.00 |
Homo sapiens |
RKAAACAVM |
KBTGTTTMY |
Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A
|
0.665
|
0.419
|
FOXP1
M09541_2.00 |
Homo sapiens |
NDGTAAACAVNN |
NNBTGTTTACHN |
Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006
|
0.665
|
0.419
|
FOXP1
M10536_2.00 |
Homo sapiens |
Transfac license required
|
Transfac license required
|
Transfac
Matys et al.(2006)
V$FOXP1_01
|
0.665
|
0.419
|
FOXP1
M04812_2.00 |
Homo sapiens |
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH |
DTGTTKWBYRTNVNNNNNNAYVRYAAACAN |
SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX
|
0.665
|
0.419
|
For this family, TFs with SR scores > 0.664 will likely have a similar motif |