CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ogr17627
(
Ophisaurus gracilis
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
Ogr17627
T189194_2.00
GigaDB (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXP1
M00838_2.00
Homo sapiens
DCRATACA
TGTATYGH
PBM
Gabut et al.(2011)
pEX0125
0.813
1.000
FOXP1
M00839_2.00
Homo sapiens
NCRATACAHNN
NNDTGTATYGN
PBM
Gabut et al.(2011)
pEX0126
0.813
1.000
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ogr17627
Forkhead
281
364
RPPFTYASLIRQAILESPEKQLTLNEIYNWFTRMFAYFRRNAATWKGAIRTNLSLHKCFIRVEDEFGSFWTVDDEEFKRGRHIQ
Links
Other
Forkhead
family TFs
Other
Ophisaurus gracilis
TFs
5 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FOXP1
Homo sapiens
ENSG00000114861
D
0.813
foxp1b
Danio rerio
ENSDARG00000014181
I
0.804
foxp1b
Gasterosteus aculeatus
ENSGACG00000011839
I
0.804
ENSPFOG00000016922
Poecilia formosa
ENSPFOG00000016922
I
0.761
ENSGMOG00000007392
Gadus morhua
ENSGMOG00000007392
I
0.440