CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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e_gw1.29.75.1
(
Phycomyces blakesleeanus
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
e_gw1.29.75.1
T189252_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXD4L4
M10564_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXD4L4_01
0.700
0.564
fd59A
M03739_2.00
Drosophila melanogaster
HWAWRTAAACAWW
WWTGTTTAYWTWD
SELEX
Nitta et al.(2015)
fd59A_1
0.690
0.564
fd59A
M03740_2.00
Drosophila melanogaster
WWAVAATAACAHN
NDTGTTATTBTWW
SELEX
Nitta et al.(2015)
fd59A_2
0.690
0.564
fd59A
M03741_2.00
Drosophila melanogaster
YWRWRTAAAYAHH
DDTRTTTAYWYWR
SELEX
Nitta et al.(2015)
fd59A_3
0.690
0.564
fd59A
M03742_2.00
Drosophila melanogaster
MWACAAYAAYAHW
WDTRTTRTTGTWK
SELEX
Nitta et al.(2015)
fd59A_4
0.690
0.564
Foxl1
M00164_2.00
Mus musculus
NNNRTMAAYA
TRTTKAYNNN
PBM
Badis et al.(2009)
Foxl1_2809
0.689
0.603
FOXL1
M03034_2.00
Homo sapiens
RTAAACA
TGTTTAY
SELEX
Jolma et al.(2013)
FOXL1_1
0.689
0.603
FOXL1
M03035_2.00
Homo sapiens
NRTAAAYAAAYAN
NTRTTTRTTTAYN
SELEX
Jolma et al.(2013)
FOXL1_2
0.689
0.603
FOXL1
M10558_2.00
Homo sapiens
DHNVHATAAAYAHNNN
NNNDTRTTTATDBNDH
Transfac
Matys et al.(2006)
V$FREAC7_01
0.689
0.603
Foxj3
M00160_2.00
Mus musculus
NRTAAACAHN
NDTGTTTAYN
PBM
Badis et al.(2009)
Foxj3_0982
0.687
0.628
Foxj3
M01981_2.00
Mus musculus
VNHHAYANN
NNTRTDDNB
PBM
Weirauch et al.(2014)
pTH6591
0.687
0.628
FOXJ3
M03046_2.00
Homo sapiens
RTAAAVAA
TTBTTTAY
SELEX
Jolma et al.(2013)
FOXJ3_1
0.687
0.628
FOXJ3
M03047_2.00
Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ3_2
0.687
0.628
FOXJ3
M03048_2.00
Homo sapiens
GTAAACATAAACA
TGTTTATGTTTAC
SELEX
Jolma et al.(2013)
FOXJ3_3
0.687
0.628
Foxj3
M03055_2.00
Mus musculus
ACGGACACAAT
ATTGTGTCCGT
SELEX
Jolma et al.(2013)
Foxj3_1
0.687
0.628
Foxj3
M03056_2.00
Mus musculus
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
Foxj3_2
0.687
0.628
Foxj3
M03057_2.00
Mus musculus
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_3
0.687
0.628
Foxj3
M03058_2.00
Mus musculus
RTAAACAWAAACA
TGTTTWTGTTTAY
SELEX
Jolma et al.(2013)
Foxj3_4
0.687
0.628
FOXJ3
M02736_2.00
Homo sapiens
AAACAATAAACA
TGTTTATTGTTT
SELEX
Jolma et al.(2010)
FOXJ3_dimer
0.687
0.628
FOXJ3
M02737_2.00
Homo sapiens
RTAAACAW
WTGTTTAY
SELEX
Jolma et al.(2010)
FOXJ3_monomer
0.687
0.628
FOXJ3
M04859_2.00
Homo sapiens
DYGTMAACAH
DTGTTKACRH
SELEX
Yin et al.(2017)
FOXJ3_eDBD_HT-SELEX
0.687
0.628
FOXJ3
M09098_2.00
Homo sapiens
WAAMMATAAACAN
NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_HUMAN.H11MO.0.A
0.687
0.628
Foxj3
M09102_2.00
Mus musculus
WAAMMATAAACAN
NTGTTTATKKTTW
Misc
Kulakovskiy et al.(2013)
FOXJ3_MOUSE.H11MO.0.A
0.687
0.628
FOXJ3
M04860_2.00
Homo sapiens
RYGTMAACAH
DTGTTKACRY
SELEX
Yin et al.(2017)
FOXJ3_eDBD_Methyl-HT-SELEX
0.687
0.628
FOXE1
M04845_2.00
Homo sapiens
BVYTAWRYAAACADN
NHTGTTTRYWTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_HT-SELEX
0.680
0.564
FOXE1
M04846_2.00
Homo sapiens
BVYTAARYAAACAWH
DWTGTTTRYTTARBV
SELEX
Yin et al.(2017)
FOXE1_eDBD_Methyl-HT-SELEX
0.680
0.564
Gm5294
M01984_2.00
Mus musculus
NNKRTAAACANN
NNTGTTTAYMNN
PBM
Weirauch et al.(2014)
pTH3802
0.677
0.564
fd64A
M06197_2.00
Drosophila melanogaster
KVWAAACA
TGTTTWBM
B1H
Zhu et al.(2011)
fd64A_SANGER_5_FBgn0004895
0.677
0.577
FOXG1
M01978_2.00
Homo sapiens
RTAAACAH
DTGTTTAY
PBM
Weirauch et al.(2014)
pTH5501
0.673
0.615
Foxg1
M00791_2.00
Mus musculus
NNNNMHAYAN
NTRTDKNNNN
PBM
Weirauch et al.(2013)
pTH2846
0.673
0.615
foxg1a
M01985_2.00
Oryzias latipes
RTAAACAH
DTGTTTAY
PBM
Weirauch et al.(2014)
pTH6729
0.673
0.615
FOXG1
M03032_2.00
Homo sapiens
RTAAACAATDGTAAACA
TGTTTACHATTGTTTAY
SELEX
Jolma et al.(2013)
FOXG1_1
0.673
0.615
FOXG1
M03033_2.00
Homo sapiens
RCGGACACAATR
YATTGTGTCCGY
SELEX
Jolma et al.(2013)
FOXG1_2
0.673
0.615
Foxg1
M03052_2.00
Mus musculus
ATAAACAAVTGTMAACA
TGTTKACABTTGTTTAT
SELEX
Jolma et al.(2013)
Foxg1_1
0.673
0.615
Foxg1
M03053_2.00
Mus musculus
MHGGACACAATC
GATTGTGTCCDK
SELEX
Jolma et al.(2013)
Foxg1_2
0.673
0.615
Foxg1
M03054_2.00
Mus musculus
GTAAACA
TGTTTAC
SELEX
Jolma et al.(2013)
Foxg1_3
0.673
0.615
FOXG1
M04839_2.00
Homo sapiens
NACRYMMACAH
DTGTKKRYGTN
SELEX
Yin et al.(2017)
FOXG1_eDBD_HT-SELEX
0.673
0.615
FOXG1
M04840_2.00
Homo sapiens
HRCGYMAACAH
DTGTTKRCGYD
SELEX
Yin et al.(2017)
FOXG1_eDBD_Methyl-HT-SELEX
0.673
0.615
SPU_007644
M01987_2.00
Strongylocentrotus purpuratus
NNHHAYDNN
NNHRTDDNN
PBM
Weirauch et al.(2014)
pTH6497
0.672
0.628
Foxc2
M00796_2.00
Mus musculus
HNNRHMAAYA
TRTTKDYNND
PBM
Weirauch et al.(2013)
pTH3796
0.670
0.603
FOXC2
M03036_2.00
Homo sapiens
NRTMAATATTDWYN
NRWHAATATTKAYN
SELEX
Jolma et al.(2013)
FOXC2_1
0.670
0.603
FOXC2
M03037_2.00
Homo sapiens
RTAAAYAAACA
TGTTTRTTTAY
SELEX
Jolma et al.(2013)
FOXC2_2
0.670
0.603
FOXC2
M03038_2.00
Homo sapiens
WAHRTMAAYAWW
WWTRTTKAYDTW
SELEX
Jolma et al.(2013)
FOXC2_3
0.670
0.603
FOXC2
M04841_2.00
Homo sapiens
NHVNRYMAACAH
DTGTTKRYNBDN
SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_1
0.670
0.603
FOXC2
M04842_2.00
Homo sapiens
RHAMAYAAACAH
DTGTTTRTKTDY
SELEX
Yin et al.(2017)
FOXC2_eDBD_HT-SELEX_2
0.670
0.603
FOXC2
M10559_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FKHL14_Q2
0.670
0.603
FOXC2
M04843_2.00
Homo sapiens
NHNNRYMAACAN
NTGTTKRYNNDN
SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_1
0.670
0.603
FOXC2
M04844_2.00
Homo sapiens
VHMMAYAAACAN
NTGTTTRTKKDB
SELEX
Yin et al.(2017)
FOXC2_eDBD_Methyl-HT-SELEX_2
0.670
0.603
Foxj2
M00790_2.00
Mus musculus
VHMAAYANN
NNTRTTKDB
PBM
Weirauch et al.(2013)
pTH3043
0.669
0.628
Foxj2
M01980_2.00
Mus musculus
RTAAACAN
NTGTTTAY
PBM
Weirauch et al.(2014)
pTH6638
0.669
0.628
FOXJ2
M03016_2.00
Homo sapiens
GTAAACARTMAACA
TGTTKAYTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ2_1
0.669
0.628
FOXJ2
M03017_2.00
Homo sapiens
RTAAACAH
DTGTTTAY
SELEX
Jolma et al.(2013)
FOXJ2_2
0.669
0.628
FOXJ2
M03018_2.00
Homo sapiens
GTAAACAWMAACA
TGTTKWTGTTTAC
SELEX
Jolma et al.(2013)
FOXJ2_3
0.669
0.628
FOXJ2
M04809_2.00
Homo sapiens
NTRTTTACAAYANN
NNTRTTGTAAAYAN
SELEX
Yin et al.(2017)
FOXJ2_eDBD_HT-SELEX
0.669
0.628
FOXJ2
M09084_2.00
Homo sapiens
WARAYAAAYA
TRTTTRTYTW
Misc
Kulakovskiy et al.(2013)
FOXJ2_HUMAN.H11MO.0.C
0.669
0.628
Foxj2
M09100_2.00
Mus musculus
WARAYAAAYA
TRTTTRTYTW
Misc
Kulakovskiy et al.(2013)
FOXJ2_MOUSE.H11MO.0.C
0.669
0.628
FOXJ2
M10527_2.00
Homo sapiens
HHNHMRAYAAAYANHNND
HNNDNTRTTTRTYKDNDD
Transfac
Matys et al.(2006)
V$FOXJ2_01
0.669
0.628
FOXJ2
M10528_2.00
Homo sapiens
VYMAYAATATTTKN
NMAAATATTRTKRB
Transfac
Matys et al.(2006)
V$FOXJ2_02
0.669
0.628
FOXJ2
M04810_2.00
Homo sapiens
NTRTTTACAAYANN
NNTRTTGTAAAYAN
SELEX
Yin et al.(2017)
FOXJ2_eDBD_Methyl-HT-SELEX
0.669
0.628
FOXD2
M03042_2.00
Homo sapiens
NRTMAAYRTTWDYN
NRHWAAYRTTKAYN
SELEX
Jolma et al.(2013)
FOXD2_1
0.667
0.564
FOXD2
M03043_2.00
Homo sapiens
RTAAAYA
TRTTTAY
SELEX
Jolma et al.(2013)
FOXD2_2
0.667
0.564
FOXD2
M04851_2.00
Homo sapiens
HWASAATAAYAWWN
NWWTRTTATTSTWD
SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_1
0.667
0.564
FOXD2
M04852_2.00
Homo sapiens
VYWANRTAAAYAH
DTRTTTAYNTWRB
SELEX
Yin et al.(2017)
FOXD2_eDBD_HT-SELEX_2
0.667
0.564
FOXD1
M02681_2.00
Homo sapiens
GTAAACAD
HTGTTTAC
SELEX
Mathelier et al.(2014)
MA0031.1
0.667
0.564
Foxd1
M10570_2.00
Mus musculus
SYWAWGTAAACADHVN
NBDHTGTTTACWTWRS
Transfac
Matys et al.(2006)
V$FREAC4_01
0.667
0.564
FOXD1
M10567_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FREAC4_02
0.667
0.564
FOXD2
M04853_2.00
Homo sapiens
HWACAATAACRWWN
NWWYGTTATTGTWD
SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_1
0.667
0.564
FOXD2
M04854_2.00
Homo sapiens
RYTRNGTMAACRD
HYGTTKACNYARY
SELEX
Yin et al.(2017)
FOXD2_eDBD_Methyl-HT-SELEX_2
0.667
0.564
foxe3
M01228_2.00
Xenopus tropicalis
WNNVHHMAYW
WRTKDDBNNW
PBM
Lambert et al.(2019)
pTH9824
0.666
0.577
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
e_gw1.29.75.1
Forkhead
1
78
KPSYSYASLISQAIGSTPYRRMTLHGIYTFISTNYPYYQMNSNGWQNSIRHNLSLNKAFIKVPRCDAEPGKGAYWTID
Links
Other
Forkhead
family TFs
Other
Phycomyces blakesleeanus
TFs
730 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy