estExt_fgenesh2_pg.C_1860025 (Branchiostoma floridae)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00250 (Forkhead) IPR001766 estExt_fgenesh2_pg.C_1860025 T189287_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Foxn4
M01011_2.00
Mus musculus
NNNVACGCNN

NNGCGTBNNN
PBM
Nakagawa et al.(2013)
Foxn4
0.840 0.837
FOXN1
M10531_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$WHN_B
0.763 0.826
Foxn1
M01010_2.00
Mus musculus
NAHRCNNNNN

NNNNNGYDTN
PBM
Nakagawa et al.(2013)
Foxn1
0.763 0.814
jumu
M01012_2.00
Drosophila melanogaster
NNNNVACGCN

NGCGTBNNNN
PBM
Nakagawa et al.(2013)
Jumeau
0.739 0.686
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
estExt_fgenesh2_pg.C_1860025 Forkhead 283 373

Links

Other Forkhead family TFs
Other Branchiostoma floridae TFs

Invalid Input OrderBy

198 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action