CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgeneshPB_pg.C_280113
(
Phycomyces blakesleeanus
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
estExt_fgeneshPB_pg.C_280113
T189300_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU06173
M01992_2.00
Neurospora crassa
RTAAACAH
DTGTTTAY
PBM
Weirauch et al.(2014)
pTH8896
0.689
0.558
HCM1
M00044_2.00
Saccharomyces cerevisiae
NRWHAACAN
NTGTTDWYN
PBM
Badis et al.(2008)
HCM1_2157
0.669
0.570
HCM1
M07473_2.00
Saccharomyces cerevisiae
VWMAACAH
DTGTTKWB
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0317.1
0.669
0.570
HCM1
M08554_2.00
Saccharomyces cerevisiae
VWMAACAH
DTGTTKWB
Misc
DeBoer et al.(2011)
YCR065W_570
0.669
0.570
fd64A
M06197_2.00
Drosophila melanogaster
KVWAAACA
TGTTTWBM
B1H
Zhu et al.(2011)
fd64A_SANGER_5_FBgn0004895
0.664
0.535
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgeneshPB_pg.C_280113
Forkhead
145
236
KPPYSYATLIAHAILSSTNRRLTLSEIYSWITTHYPYYSAGEHGWQNSIRHNLSLNKAFVKLDRTSSKTTLCGKGSFWTIQLGSEKPFIENL
Links
Other
Forkhead
family TFs
Other
Phycomyces blakesleeanus
TFs
199 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy