CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_gwp.C_60230
(
Branchiostoma floridae
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
estExt_gwp.C_60230
T189311_2.00
JGI (2012-Mar-17)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXQ1
M04823_2.00
Homo sapiens
YWRHRTAAACWD
HWGTTTAYDYWR
SELEX
Yin et al.(2017)
FOXQ1_eDBD_HT-SELEX
0.747
0.860
FOXQ1
M09093_2.00
Homo sapiens
RMATAAACAAYD
HRTTGTTTATKY
Misc
Kulakovskiy et al.(2013)
FOXQ1_HUMAN.H11MO.0.C
0.747
0.860
Foxq1
M09105_2.00
Mus musculus
RMATAAACAAYD
HRTTGTTTATKY
Misc
Kulakovskiy et al.(2013)
FOXQ1_MOUSE.H11MO.0.C
0.747
0.860
FOXQ1_RAT
M10572_2.00
Rattus norvegicus
AWATAAACAWTN
NAWTGTTTAKWT
Transfac
Matys et al.(2006)
V$HFH1_01
0.747
0.860
FOXQ1
M04824_2.00
Homo sapiens
YWAYRTAAACWD
HWGTTTAYRTWR
SELEX
Yin et al.(2017)
FOXQ1_eDBD_Methyl-HT-SELEX
0.747
0.860
fd64A
M06197_2.00
Drosophila melanogaster
KVWAAACA
TGTTTWBM
B1H
Zhu et al.(2011)
fd64A_SANGER_5_FBgn0004895
0.688
0.535
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_gwp.C_60230
Forkhead
98
188
KPPFSYIALIAMAIRDSPNNRLTLAEINDYLMKKFEFFRGPYTGWRNSVRHNLSLNECFTKVLRDPSRPWGKDNYWTINPNSEYTFADGVF
Links
Other
Forkhead
family TFs
Other
Branchiostoma floridae
TFs
92 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
CapteG175391
Capitella teleta
CapteG175391
I
0.816
ENSONIG00000021432
Oreochromis niloticus
ENSONIG00000021432
I
0.788
ENSLACG00000001296
Latimeria chalumnae
ENSLACG00000001296
I
0.781
ENSPFOG00000020363
Poecilia formosa
ENSPFOG00000020363
I
0.780
ENSCSAVG00000006732
Ciona savignyi
ENSCSAVG00000006732
I
0.775
foxq
Ciona intestinalis
ENSCING00000019322
I
0.774
Sakowv30035367m.g
Saccoglossus kowalevskii
Sakowv30035367m.g
I
0.769
foxq1
Xenopus tropicalis
XB-GENE-483842
I
0.756
ENSLOCG00000012990
Lepisosteus oculatus
ENSLOCG00000012990
I
0.755
ENSPFOG00000020964
Poecilia formosa
ENSPFOG00000020964
I
0.755
ENSAMXG00000006160
Astyanax mexicanus
ENSAMXG00000006160
I
0.755
ENSONIG00000006405
Oreochromis niloticus
ENSONIG00000006405
I
0.755
foxq1b
Gasterosteus aculeatus
ENSGACG00000005009
I
0.755
ENSXMAG00000019810
Xiphophorus maculatus
ENSXMAG00000019810
I
0.755
foxq1b
Takifugu rubripes
ENSTRUG00000001789
I
0.755
ENSAMXG00000013180
Astyanax mexicanus
ENSAMXG00000013180
I
0.755
ENSGMOG00000017063
Gadus morhua
ENSGMOG00000017063
I
0.751
foxq1a
Danio rerio
ENSDARG00000030896
I
0.751
ENSPMAG00000004942
Petromyzon marinus
ENSPMAG00000004942
I
0.748
Foxq1
Mus musculus
ENSMUSG00000038415
D
0.747
FOXQ1_RAT
Rattus norvegicus
FOXQ1_RAT
D
0.747
ENSSHAG00000012341
Sarcophilus harrisii
ENSSHAG00000012341
I
0.747
FOXQ1
Pan troglodytes
ENSPTRG00000029883
I
0.747
ENSMPUG00000018966
Mustela putorius furo
ENSMPUG00000018966
I
0.747
FOXQ1
Pteropus vampyrus
ENSPVAG00000015362
I
0.747
FOXQ1
Erinaceus europaeus
ENSEEUG00000009057
I
0.747
FOXQ1
Monodelphis domestica
ENSMODG00000008316
I
0.747
ENSCSAG00000019113
Chlorocebus sabaeus
ENSCSAG00000019113
I
0.747
FOXQ1
Homo sapiens
ENSG00000164379
D
0.747
ENSMEUG00000009518
Macropus eugenii
ENSMEUG00000009518
I
0.747
ENSGMOG00000020500
Gadus morhua
ENSGMOG00000020500
I
0.743
foxq1b
Danio rerio
ENSDARG00000055395
I
0.742
FOXQ1
Loxodonta africana
ENSLAFG00000000082
I
0.740
TriadG30486
Trichoplax adhaerens
TriadG30486
I
0.735
Myotis_brandtii_Foxq1_10020361
Myotis brandtii
Myotis_brandtii_Foxq1_10020361
I
0.735
SPU_019345
Strongylocentrotus purpuratus
SPU_019345
I
0.729
ENSETEG00000003274
Echinops telfairi
ENSETEG00000003274
I
0.726
ACHR002653
Anopheles christyi
ACHR002653
I
0.712
PPAI008193
Phlebotomus papatasi
PPAI008193
I
0.704
AEPI005469
Anopheles epiroticus
AEPI005469
I
0.700
ASTEI08603
Anopheles stephensi
ASTEI08603
I
0.700
AFAF001261
Anopheles farauti
AFAF001261
I
0.700
AQUA003875
Anopheles quadriannulatus
AQUA003875
I
0.700
AMEM011552
Anopheles merus
AMEM011552
I
0.700
AMIN010055
Anopheles minimus
AMIN010055
I
0.700
AFUN002781
Anopheles funestus
AFUN002781
I
0.700
AMEC002939
Anopheles melas
AMEC002939
I
0.700
AATE015574
Anopheles atroparvus
AATE015574
I
0.700
ADIR003600
Anopheles dirus
ADIR003600
I
0.700
AARA009120
Anopheles arabiensis
AARA009120
I
0.700
AALB005271
Anopheles albimanus
AALB005271
I
0.700
ACUA018305
Anopheles culicifacies
ACUA018305
I
0.700
ADAC006154
Anopheles darlingi
ADAC006154
I
0.700
AGAP006786
Anopheles gambiae
AGAP006786
I
0.700
GK17509
Drosophila willistoni
FBgn0219508
I
0.699
ECANG7_02113
Echinococcus canadensis
ECANG7_02113
I
0.699
TASK_0000386601
Taenia asiatica
TASK_0000386601
I
0.699
MDOA008621
Musca domestica
MDOA008621
I
0.699
TsM_000061900
Taenia solium
TsM_000061900
I
0.699
EmuJ_000693700
Echinococcus multilocularis
EmuJ_000693700
I
0.699
ACYPI008133
Acyrthosiphon pisum
ACYPI008133
I
0.694
GF25022
Drosophila ananassae
FBgn0102014
I
0.693
LCUP005783
Lucilia cuprina
LCUP005783
I
0.693
GA10915
Drosophila pseudoobscura
FBgn0070971
I
0.693
GL16060
Drosophila persimilis
FBgn0153664
I
0.693
GI12553
Drosophila mojavensis
FBgn0135310
I
0.692
SNAPOd2T00026236001
Oikopleura dioica
SNAPOd2T00026236001
I
0.691
HelroG75694
Helobdella robusta
HelroG75694
I
0.690
EmuJ_000446500
Echinococcus multilocularis
EmuJ_000446500
I
0.688
ECANG7_01929
Echinococcus canadensis
ECANG7_01929
I
0.688
GD13797
Drosophila simulans
FBgn0185497
I
0.688
GM14607
Drosophila sechellia
FBgn0169528
I
0.688
fd64A
Drosophila melanogaster
FBgn0004895
D
0.688
GE21395
Drosophila yakuba
FBgn0238655
I
0.688
GG15176
Drosophila erecta
FBgn0107429
I
0.688
L798_11763
Zootermopsis nevadensis
L798_11763
I
0.688
BGIBMGA012276
Bombyx mori
BGIBMGA012276
I
0.687
CGI_10008560
Crassostrea gigas
CGI_10008560
I
0.687
TsM_000741900
Taenia solium
TsM_000741900
I
0.687
TASK_0000373101
Taenia asiatica
TASK_0000373101
I
0.687
TTAC_0000989301
Hydatigera taeniaeformis
TTAC_0000989301
I
0.687
HMEL012080
Heliconius melpomene
HMEL012080
I
0.687
GJ15456
Drosophila virilis
FBgn0202649
I
0.686
MCOS_0000162301
Mesocestoides corti
MCOS_0000162301
I
0.684
NEMVEDRAFT_v1g201028
Nematostella vectensis
NEMVEDRAFT_v1g201028
N
0.682
L892_g23805
Steinernema scapterisci
L892_g23805
I
0.673
ENSPMAG00000004457
Petromyzon marinus
ENSPMAG00000004457
I
0.672
CLEC000012
Cimex lectularius
CLEC000012
I
0.669
HDID_0000182601
Hymenolepis diminuta
HDID_0000182601
I
0.668
HmN_000866900
Hymenolepis microstoma
HmN_000866900
I
0.668
HmN_000867700
Hymenolepis microstoma
HmN_000867700
I
0.668
foxi3a
Danio rerio
ENSDARG00000055926
I
0.664