gw.384.13.1 (Branchiostoma floridae)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00250 (Forkhead) IPR001766 gw.384.13.1 T189365_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
FOXN3
M01227_2.00 		Homo sapiens
GTAAACAA
TTGTTTAC		 PBM
Lambert et al.(2019)
pTH11266 		0.832 0.884
NEMVEDRAFT_v1g67209
M01016_2.00 		Nematostella vectensis
NNDWHRMNNN
NNNKYDWHNN		 PBM
Nakagawa et al.(2013)
FoxN2-3_Nvec 		0.805 0.791
FOXN2
M01007_2.00 		Homo sapiens
NNGACGCNN
NNGCGTCNN		 PBM
Nakagawa et al.(2013)
FOXN2 		0.759 0.767
FOXN2
M04835_2.00 		Homo sapiens
NNGCGTSNNNNNSACGCNN
NNGCGTSNNNNNSACGCNN		 SELEX
Yin et al.(2017)
FOXN2_eDBD_HT-SELEX 		0.759 0.767
FOXN2
M04836_2.00 		Homo sapiens
NGCATMRBNNYKATGCH
DGCATMRNNVYKATGCN		 SELEX
Yin et al.(2017)
FOXN2_eDBD_Methyl-HT-SELEX 		0.759 0.767
CHES-1-like
M01013_2.00 		Drosophila melanogaster
NNNHHRMNNN
NNNKYDDNNN		 PBM
Nakagawa et al.(2013)
CHES-1-like 		0.701 0.709
CHES-1-like
M03745_2.00 		Drosophila melanogaster
DHRTAAACAAW
WTTGTTTAYDH		 SELEX
Nitta et al.(2015)
CHES-1-like_1 		0.701 0.709
CHES-1-like
M03746_2.00 		Drosophila melanogaster
GCGTCNNYRTAAACAAW
WTTGTTTAYRNNGACGC		 SELEX
Nitta et al.(2015)
CHES-1-like_2 		0.701 0.709
CHES-1-like
M03747_2.00 		Drosophila melanogaster
WNVGCGTCHWNGACGCNNW
WNNGCGTCNWDGACGCBNW		 SELEX
Nitta et al.(2015)
CHES-1-like_3 		0.701 0.709
CHES-1-like
M03748_2.00 		Drosophila melanogaster
DNGCGTCHNNDGACGCNN
NNGCGTCHNNDGACGCNH		 SELEX
Nitta et al.(2015)
CHES-1-like_4 		0.701 0.709
CHES-1-like
M03749_2.00 		Drosophila melanogaster
HNGCGTCHNGACGCNN
NNGCGTCNDGACGCND		 SELEX
Nitta et al.(2015)
CHES-1-like_5 		0.701 0.709
TriadG17577
M01018_2.00 		Trichoplax adhaerens
NNNHHDNNNN
NNNNHDDNNN		 PBM
Nakagawa et al.(2013)
FoxN2_3 		0.675 0.779
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw.384.13.1 Forkhead 79 168

Links

Other Forkhead family TFs
Other Branchiostoma floridae TFs

205 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
gw.10.104.1 Branchiostoma floridae gw.10.104.1 I 0.895
Ogr01321 Ophisaurus gracilis Ogr01321 I 0.857
foxn3 Danio rerio ENSDARG00000012833 I 0.857
ENSAMXG00000018596 Astyanax mexicanus ENSAMXG00000018596 I 0.857
FOXN3 Otolemur garnettii ENSOGAG00000001733 I 0.857
ches1 Danio rerio ENSDARG00000043553 I 0.853
CGI_10011126 Crassostrea gigas CGI_10011126 I 0.837
FOXN3 Homo sapiens ENSG00000053254 D 0.832
ENSSTOG00000014643 Ictidomys tridecemlineatus ENSSTOG00000014643 I 0.832
FOXN3 Tursiops truncatus ENSTTRG00000000817 I 0.832
FOXN3 Meleagris gallopavo ENSMGAG00000013026 I 0.832
FOXN3 Cavia porcellus ENSCPOG00000004079 I 0.832
ENSLACG00000015298 Latimeria chalumnae ENSLACG00000015298 I 0.832
FOXN3 Oryctolagus cuniculus ENSOCUG00000004392 I 0.832
ENSMPUG00000008174 Mustela putorius furo ENSMPUG00000008174 I 0.832
FOXN3 Felis catus ENSFCAG00000012929 I 0.832
ENSSHAG00000010850 Sarcophilus harrisii ENSSHAG00000010850 I 0.832
FOXN3 Dasypus novemcinctus ENSDNOG00000003188 I 0.832
ENSFALG00000012332 Ficedula albicollis ENSFALG00000012332 I 0.832
ENSEEUG00000008958 Erinaceus europaeus ENSEEUG00000008958 I 0.832
ENSTGUG00000012441 Taeniopygia guttata ENSTGUG00000012441 I 0.832
FOXN3 Ochotona princeps ENSOPRG00000002931 I 0.832
FOXN3 Equus caballus ENSECAG00000026917 I 0.832
FOXN3 Macaca mulatta ENSMMUG00000019898 I 0.832
FOXN3 Gorilla gorilla ENSGGOG00000023852 I 0.832
ENSPSIG00000013517 Pelodiscus sinensis ENSPSIG00000013517 I 0.832
FOXN3 Callithrix jacchus ENSCJAG00000017620 I 0.832
ENSDORG00000007387 Dipodomys ordii ENSDORG00000007387 I 0.832
FOXN3 Tupaia belangeri ENSTBEG00000003603 I 0.832
ENSP00000261302 Macaca fascicularis ENSP00000261302 I 0.832
FOXN3 Anolis carolinensis ENSACAG00000012791 I 0.832
ENSNLEG00000016989 Nomascus leucogenys ENSNLEG00000016989 I 0.832
ENSAMEG00000001627 Ailuropoda melanoleuca ENSAMEG00000001627 I 0.832
FOXN3 Procavia capensis ENSPCAG00000013761 I 0.832
foxn3 Xenopus tropicalis XB-GENE-483117 I 0.832
FOXN3 Myotis lucifugus ENSMLUG00000008780 I 0.832
ENSPANG00000016397 Papio anubis ENSPANG00000016397 I 0.832
FOXN3 Pan troglodytes ENSPTRG00000006614 I 0.832
FOXN3 Sus scrofa ENSSSCG00000002429 I 0.832
ENSAPLG00000009060 Anas platyrhynchos ENSAPLG00000009060 I 0.832
Foxn3 Rattus norvegicus ENSRNOG00000004709 I 0.832
ENSLOCG00000008977 Lepisosteus oculatus ENSLOCG00000008977 I 0.832
FOXN3 Loxodonta africana ENSLAFG00000016005 I 0.832
FOXN3 Canis familiaris ENSCAFG00000011068 I 0.832
Foxn3 Mus musculus ENSMUSG00000033713 I 0.832
FOXN3 Gallus gallus ENSGALG00000010665 I 0.832
ENSONIG00000001158 Oreochromis niloticus ENSONIG00000001158 I 0.831
ches1 Oryzias latipes ENSORLG00000010729 I 0.831
ENSAMXG00000009484 Astyanax mexicanus ENSAMXG00000009484 I 0.831
ches1 Takifugu rubripes ENSTRUG00000003497 I 0.831
ENSPFOG00000001305 Poecilia formosa ENSPFOG00000001305 I 0.831
Sakowv30028653m.g Saccoglossus kowalevskii Sakowv30028653m.g I 0.823
CapteG102038 Capitella teleta CapteG102038 I 0.822
BGLB008394 Biomphalaria glabrata BGLB008394 I 0.817
NEMVEDRAFT_v1g67209 Nematostella vectensis NEMVEDRAFT_v1g67209 D 0.805
Cmyd_10013867 Chelonia mydas Cmyd_10013867 I 0.804
CABZ01056727.1 Danio rerio ENSDARG00000055574 I 0.801
ENSAMXG00000001149 Astyanax mexicanus ENSAMXG00000001149 I 0.801
LotgiG138633 Lottia gigantea LotgiG138633 I 0.800
ENSONIG00000009856 Oreochromis niloticus ENSONIG00000009856 I 0.796
foxn2b Gasterosteus aculeatus ENSGACG00000005486 I 0.796
L798_02484 Zootermopsis nevadensis L798_02484 I 0.795
foxn3.L Xenopus laevis XB-GENE-6448222 I 0.794
foxn3.S Xenopus laevis XB-GENE-864945 I 0.794
ENSPFOG00000015286 Poecilia formosa ENSPFOG00000015286 I 0.792
foxn2b Oryzias latipes ENSORLG00000011005 I 0.788
foxn2b Tetraodon nigroviridis ENSTNIG00000016601 I 0.788
foxn2b Takifugu rubripes ENSTRUG00000013724 I 0.788
foxn2b Danio rerio ENSDARG00000045105 I 0.785
ENSBTAG00000046684 Bos taurus ENSBTAG00000046684 I 0.779
GB45298 Apis mellifera GB45298 I 0.777
NV15444 Nasonia vitripennis NV15444 I 0.777
Cflo_06973--XP_625198.2_APIME Camponotus floridanus Cflo_06973--XP_625198.2_APIME I 0.777
Hsal_12079--XP_625198.2_APIME Harpegnathos saltator Hsal_12079--XP_625198.2_APIME I 0.777
ENSFALG00000011112 Ficedula albicollis ENSFALG00000011112 I 0.775
KGM_12006 Danaus plexippus KGM_12006 I 0.773
HMEL010214 Heliconius melpomene HMEL010214 I 0.773
ACYPI005943 Acyrthosiphon pisum ACYPI005943 I 0.772
ENSAPLG00000016372 Anas platyrhynchos ENSAPLG00000016372 I 0.770
FOXN2 Meleagris gallopavo ENSMGAG00000005062 I 0.770
Ogr07715 Ophisaurus gracilis Ogr07715 I 0.770
FOXN2 Anolis carolinensis ENSACAG00000014236 I 0.770
SINV12530 Solenopsis invicta SINV12530 I 0.769
FOXN3 Monodelphis domestica ENSMODG00000003001 I 0.769
PHUM603440 Pediculus humanus PHUM603440 I 0.767
ENSLACG00000013808 Latimeria chalumnae ENSLACG00000013808 I 0.765
ENSLOCG00000016292 Lepisosteus oculatus ENSLOCG00000016292 I 0.762
FOXN2 Equus caballus ENSECAG00000008390 I 0.760
FOXN2 Oryctolagus cuniculus ENSOCUG00000009784 I 0.760
ENSPPYG00000012423 Pongo abelii ENSPPYG00000012423 I 0.759
FOXN2 Vicugna pacos ENSVPAG00000009218 I 0.759
ENSP00000394031-D1 Bos grunniens ENSP00000394031-D1 I 0.759
ENSP00000343633 Macaca fascicularis ENSP00000343633 I 0.759
Myotis_brandtii_FOXN2_10033482 Myotis brandtii Myotis_brandtii_FOXN2_10033482 I 0.759
Pvit_15105 Pogona vitticeps Pvit_15105 I 0.759
foxn2 Xenopus tropicalis XB-GENE-952918 I 0.759
FOXN2 Procavia capensis ENSPCAG00000005254 I 0.759
ENSTSYG00000014704 Tarsius syrichta ENSTSYG00000014704 I 0.759
FOXN2 Sorex araneus ENSSARG00000003696 I 0.759
Foxn2 Rattus norvegicus ENSRNOG00000040110 I 0.759
ENSSHAG00000001461 Sarcophilus harrisii ENSSHAG00000001461 I 0.759
FOXN2 Sus scrofa ENSSSCG00000029593 I 0.759
ENSSTOG00000000862 Ictidomys tridecemlineatus ENSSTOG00000000862 I 0.759
FOXN2 Pan troglodytes ENSPTRG00000011908 I 0.759
ENSPANG00000013263 Papio anubis ENSPANG00000013263 I 0.759
FOXN2 Loxodonta africana ENSLAFG00000012466 I 0.759
FOXN2 Dasypus novemcinctus ENSDNOG00000035609 I 0.759
FOXN2 Callithrix jacchus ENSCJAG00000010894 I 0.759
FOXN2 Canis familiaris ENSCAFG00000029603 I 0.759
FOXN2 Myotis lucifugus ENSMLUG00000017567 I 0.759
FOXN2 Erinaceus europaeus ENSEEUG00000015228 I 0.759
FOXN2 Gorilla gorilla ENSGGOG00000008171 I 0.759
FOXN2 Echinops telfairi ENSETEG00000007413 I 0.759
ENSAMEG00000006413 Ailuropoda melanoleuca ENSAMEG00000006413 I 0.759
FOXN2 Bos taurus ENSBTAG00000015151 I 0.759
FOXN2 Felis catus ENSFCAG00000022828 I 0.759
FOXN2 Homo sapiens ENSG00000170802 D 0.759
FOXN2 Macaca mulatta ENSMMUG00000020677 I 0.759
ENSMEUG00000000214 Macropus eugenii ENSMEUG00000000214 I 0.759
ENSCPOG00000026162 Cavia porcellus ENSCPOG00000026162 I 0.759
ENSCSAG00000013601 Chlorocebus sabaeus ENSCSAG00000013601 I 0.759
FOXN2 Monodelphis domestica ENSMODG00000001169 I 0.759
ENSNLEG00000008649 Nomascus leucogenys ENSNLEG00000008649 I 0.759
ENSOARG00000004763 Ovis aries ENSOARG00000004763 I 0.759
ENSMPUG00000010993 Mustela putorius furo ENSMPUG00000010993 I 0.759
Foxn2 Mus musculus ENSMUSG00000034998 I 0.759
FOXN2 Otolemur garnettii ENSOGAG00000011745 I 0.759
YQE_03399 Dendroctonus ponderosae YQE_03399 I 0.757
YQE_02630 Dendroctonus ponderosae YQE_02630 I 0.757
YQE_02614 Dendroctonus ponderosae YQE_02614 I 0.757
ENSGMOG00000016028 Gadus morhua ENSGMOG00000016028 I 0.756
foxn2.S Xenopus laevis XB-GENE-952923 I 0.756
SPU_015243 Strongylocentrotus purpuratus SPU_015243 I 0.744
ENSXMAG00000013148 Xiphophorus maculatus ENSXMAG00000013148 I 0.740
ENSPFOG00000021830 Poecilia formosa ENSPFOG00000021830 I 0.740
ENSPMAG00000007171 Petromyzon marinus ENSPMAG00000007171 I 0.740
ENSXMAG00000001667 Xiphophorus maculatus ENSXMAG00000001667 I 0.738
Foxn2 Dipodomys ordii ENSDORG00000007020 I 0.735
ENSAMXG00000008216 Astyanax mexicanus ENSAMXG00000008216 I 0.735
ENSLOCG00000000880 Lepisosteus oculatus ENSLOCG00000000880 I 0.732
FOXN3 Pteropus vampyrus ENSPVAG00000002967 I 0.732
ENSGACG00000017049 Gasterosteus aculeatus ENSGACG00000017049 I 0.730
ENSTNIG00000009703 Tetraodon nigroviridis ENSTNIG00000009703 I 0.730
ENSLACG00000006234 Latimeria chalumnae ENSLACG00000006234 I 0.727
TC030764 Tribolium castaneum TC030764 I 0.721
tetur19g01540 Tetranychus urticae tetur19g01540 I 0.721
ENSTNIG00000002057 Tetraodon nigroviridis ENSTNIG00000002057 I 0.720
FOXN2 Pteropus vampyrus ENSPVAG00000003737 I 0.718
Myotis_brandtii_FOXN3_10022354 Myotis brandtii Myotis_brandtii_FOXN3_10022354 I 0.717
ENSOARG00000003363 Ovis aries ENSOARG00000003363 I 0.715
Ocbimv22027168m.g Octopus bimaculoides Ocbimv22027168m.g I 0.714
FOXN2 Ochotona princeps ENSOPRG00000007661 I 0.714
ENSGMOG00000018188 Gadus morhua ENSGMOG00000018188 I 0.711
ENSAMXG00000011599 Astyanax mexicanus ENSAMXG00000011599 I 0.710
ACEP19737 Atta cephalotes ACEP19737 I 0.709
AFAF006655 Anopheles farauti AFAF006655 I 0.709
AGAP013178 Anopheles gambiae AGAP013178 I 0.708
CPIJ002020 Culex quinquefasciatus CPIJ002020 I 0.708
AQUA002332 Anopheles quadriannulatus AQUA002332 I 0.708
AMAM012648 Anopheles maculatus AMAM012648 I 0.708
AAEL008832 Aedes aegypti AAEL008832 I 0.708
AMEC021917 Anopheles melas AMEC021917 I 0.708
AMIN003345 Anopheles minimus AMIN003345 I 0.708
ASIS003979 Anopheles sinensis ASIS003979 I 0.708
AFUN001697 Anopheles funestus AFUN001697 I 0.708
ACUA012004 Anopheles culicifacies ACUA012004 I 0.708
CpipJ_CPIJ002020 Culex pipiens CpipJ_CPIJ002020 I 0.708
LLOJ006903 Lutzomyia longipalpis LLOJ006903 I 0.708
AARA006907 Anopheles arabiensis AARA006907 I 0.708
ASTEI05563 Anopheles stephensi ASTEI05563 I 0.708
AATE000717 Anopheles atroparvus AATE000717 I 0.708
MDOA011809 Musca domestica MDOA011809 I 0.705
LCUP017282 Lucilia cuprina LCUP017282 I 0.705
AALB008878 Anopheles albimanus AALB008878 I 0.704
si:ch211-145o7.3 Danio rerio ENSDARG00000061548 I 0.704
ADAC006994 Anopheles darlingi ADAC006994 I 0.704
ML077613a Mnemiopsis leidyi ML077613a I 0.703
GL14605 Drosophila persimilis FBgn0152210 I 0.701
GM17463 Drosophila sechellia FBgn0172373 I 0.701
GJ18953 Drosophila virilis FBgn0206099 I 0.701
GK19775 Drosophila willistoni FBgn0221773 I 0.701
GI14920 Drosophila mojavensis FBgn0137671 I 0.701
GH12836 Drosophila grimshawi FBgn0120315 I 0.701
CHES-1-like Drosophila melanogaster FBgn0029504 D 0.701
GF21122 Drosophila ananassae FBgn0098127 I 0.701
GG17614 Drosophila erecta FBgn0109837 I 0.701
GA27773 Drosophila pseudoobscura FBgn0249137 I 0.701
GE17515 Drosophila yakuba FBgn0234975 I 0.701
ADIR002427 Anopheles dirus ADIR002427 I 0.700
ENSCJAG00000033311 Callithrix jacchus ENSCJAG00000033311 I 0.697
ENSOANG00000003851 Ornithorhynchus anatinus ENSOANG00000003851 I 0.694
BGIBMGA008311 Bombyx mori BGIBMGA008311 I 0.692
SMAR014430 Strigamia maritima SMAR014430 I 0.692
ENSCAFG00000017486 Canis familiaris ENSCAFG00000017486 I 0.692
ENSCJAG00000034742 Callithrix jacchus ENSCJAG00000034742 I 0.689
ENSGMOG00000003346 Gadus morhua ENSGMOG00000003346 I 0.686
DAPPUDRAFT_8207 Daphnia pulex DAPPUDRAFT_8207 I 0.683
foxn2/3 Ciona intestinalis ENSCING00000001109 I 0.679
CLEC003208 Cimex lectularius CLEC003208 I 0.676
ENSCJAG00000032477 Callithrix jacchus ENSCJAG00000032477 I 0.675
TriadG17577 Trichoplax adhaerens TriadG17577 D 0.675
ENSCSAVG00000007298 Ciona savignyi ENSCSAVG00000007298 I 0.675
AMEM007698 Anopheles merus AMEM007698 I 0.672
FOXN2 Choloepus hoffmanni ENSCHOG00000000109 I 0.671
FOXN2 Tursiops truncatus ENSTTRG00000003735 I 0.664