CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Ocbimv22006019m.g
(
Octopus bimaculoides
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
Ocbimv22006019m.g
T189374_2.00
JGI:Metazome (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Foxj1
M00161_2.00
Mus musculus
NNHAAACAAANN
NNTTTGTTTDNN
PBM
Badis et al.(2009)
Foxj1_3125
0.798
0.733
FOXJ1
M10547_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HFH4_01
0.798
0.733
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Ocbimv22006019m.p
Forkhead
128
216
KPPFSYAALICMAMKASPSNKMTLSAIYSWITDNFVYYRMADPSWQNSIRHNLSLNKCFQKVPRRKDEPGKGGFWKVNPEYIDQIENGI
Links
Other
Forkhead
family TFs
Other
Octopus bimaculoides
TFs
143 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy