SNAPOd2T00016009001 (Oikopleura dioica)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00250 (Forkhead) IPR001766 SNAPOd2T00016009001 T189653_2.00 Misc (2018-Jan-19)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
foxi4.2.S
M10576_2.00 		Xenopus laevis
WNWATAAACAWNNR
YNNWTGTTTATWNW		 Transfac
Matys et al.(2006)
V$XFD2_01 		0.795 0.895
FOXI1
M03026_2.00 		Homo sapiens
GTAAACA
TGTTTAC		 SELEX
Jolma et al.(2013)
FOXI1_1 		0.767 0.884
FOXI1
M03027_2.00 		Homo sapiens
RTGTKTACGGTAAACAA
TTGTTTACCGTAMACAY		 SELEX
Jolma et al.(2013)
FOXI1_2 		0.767 0.884
FOXI1
M04827_2.00 		Homo sapiens
NNNNNRTMAACAN
NTGTTKAYNNNNN		 SELEX
Yin et al.(2017)
FOXI1_eDBD_HT-SELEX 		0.767 0.884
FOXI1
M04829_2.00 		Homo sapiens
AAYGTAAACAMW
WKTGTTTACRTT		 SELEX
Yin et al.(2017)
FOXI1_FL_HT-SELEX 		0.767 0.884
FOXI1
M09095_2.00 		Homo sapiens
RRCCAATCAVAD
HTBTGATTGGYY		 Misc
Kulakovskiy et al.(2013)
FOXI1_HUMAN.H11MO.0.B 		0.767 0.884
FOXI1
M10556_2.00 		Homo sapiens
HAWAYAAAYAHVH
DBDTRTTTRTWTD		 Transfac
Matys et al.(2006)
V$HFH3_01 		0.767 0.884
FOXI1
M04828_2.00 		Homo sapiens
NWWVHRTAAACAH
DTGTTTAYDBWWN		 SELEX
Yin et al.(2017)
FOXI1_eDBD_Methyl-HT-SELEX 		0.767 0.884
FOXI1
M04830_2.00 		Homo sapiens
AAYRTAAACAAW
WTTGTTTAYRTT		 SELEX
Yin et al.(2017)
FOXI1_FL_Methyl-HT-SELEX 		0.767 0.884
Foxi1
M09109_2.00 		Mus musculus
RRCCAATCAVAD
HTBTGATTGGYY		 Misc
Kulakovskiy et al.(2013)
FOXI1_MOUSE.H11MO.0.B 		0.767 0.872
CBG14280
M01974_2.00 		Caenorhabditis briggsae
RTAAACAN
NTGTTTAY		 PBM
Weirauch et al.(2014)
pTH6734 		0.690 0.651
slp1
M01986_2.00 		Drosophila melanogaster
NRTAAACANN
NNTGTTTAYN		 PBM
Weirauch et al.(2014)
pTH6549 		0.684 0.628
slp1
M03736_2.00 		Drosophila melanogaster
WDYRTAAACAWW
WWTGTTTAYRHW		 SELEX
Nitta et al.(2015)
slp1_1 		0.684 0.628
slp1
M03737_2.00 		Drosophila melanogaster
RTRTAAACAAAYADH
DHTRTTTGTTTAYAY		 SELEX
Nitta et al.(2015)
slp1_2 		0.684 0.628
slp1
M06474_2.00 		Drosophila melanogaster
WRBVWAAACAH
DTGTTTWBVYW		 B1H
Mathelier et al.(2014)
MA0458.1 		0.684 0.628
slp1
M06195_2.00 		Drosophila melanogaster
WRBVWAAACAH
DTGTTTWBVYW		 B1H
Zhu et al.(2011)
slp1_NAR_FBgn0003430 		0.684 0.628
slp1
M09669_2.00 		Drosophila melanogaster
ATGTMAACAMAVV
BBTKTGTTKACAT		 Misc
Kulakovskiy et al.(2009)
slp1 		0.684 0.628
FOXG1
M01978_2.00 		Homo sapiens
RTAAACAH
DTGTTTAY		 PBM
Weirauch et al.(2014)
pTH5501 		0.672 0.605
Foxg1
M00791_2.00 		Mus musculus
NNNNMHAYAN
NTRTDKNNNN		 PBM
Weirauch et al.(2013)
pTH2846 		0.672 0.605
FOXG1
M03032_2.00 		Homo sapiens
RTAAACAATDGTAAACA
TGTTTACHATTGTTTAY		 SELEX
Jolma et al.(2013)
FOXG1_1 		0.672 0.605
FOXG1
M03033_2.00 		Homo sapiens
RCGGACACAATR
YATTGTGTCCGY		 SELEX
Jolma et al.(2013)
FOXG1_2 		0.672 0.605
Foxg1
M03052_2.00 		Mus musculus
ATAAACAAVTGTMAACA
TGTTKACABTTGTTTAT		 SELEX
Jolma et al.(2013)
Foxg1_1 		0.672 0.605
Foxg1
M03053_2.00 		Mus musculus
MHGGACACAATC
GATTGTGTCCDK		 SELEX
Jolma et al.(2013)
Foxg1_2 		0.672 0.605
Foxg1
M03054_2.00 		Mus musculus
GTAAACA
TGTTTAC		 SELEX
Jolma et al.(2013)
Foxg1_3 		0.672 0.605
FOXG1
M04839_2.00 		Homo sapiens
NACRYMMACAH
DTGTKKRYGTN		 SELEX
Yin et al.(2017)
FOXG1_eDBD_HT-SELEX 		0.672 0.605
FOXG1
M04840_2.00 		Homo sapiens
HRCGYMAACAH
DTGTTKRCGYD		 SELEX
Yin et al.(2017)
FOXG1_eDBD_Methyl-HT-SELEX 		0.672 0.605
foxg1a
M01985_2.00 		Oryzias latipes
RTAAACAH
DTGTTTAY		 PBM
Weirauch et al.(2014)
pTH6729 		0.665 0.593
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
SNAPOd2T00016009001 Forkhead 112 201

Links

Other Forkhead family TFs
Other Oikopleura dioica TFs

Invalid Input OrderBy

398 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action