CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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foxq1
(
Xenopus tropicalis
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
XB-GENE-483842
T189685_2.00
Misc (2018-Jan-19)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXQ1
M04823_2.00
Homo sapiens
YWRHRTAAACWD
HWGTTTAYDYWR
SELEX
Yin et al.(2017)
FOXQ1_eDBD_HT-SELEX
0.786
0.953
FOXQ1
M09093_2.00
Homo sapiens
RMATAAACAAYD
HRTTGTTTATKY
Misc
Kulakovskiy et al.(2013)
FOXQ1_HUMAN.H11MO.0.C
0.786
0.953
Foxq1
M09105_2.00
Mus musculus
RMATAAACAAYD
HRTTGTTTATKY
Misc
Kulakovskiy et al.(2013)
FOXQ1_MOUSE.H11MO.0.C
0.786
0.953
FOXQ1_RAT
M10572_2.00
Rattus norvegicus
AWATAAACAWTN
NAWTGTTTAKWT
Transfac
Matys et al.(2006)
V$HFH1_01
0.786
0.953
FOXQ1
M04824_2.00
Homo sapiens
YWAYRTAAACWD
HWGTTTAYRTWR
SELEX
Yin et al.(2017)
FOXQ1_eDBD_Methyl-HT-SELEX
0.786
0.953
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ABA39837
Forkhead
55
145
KPPYSYIALIAMAIKDSASGRLTLAEINDYLMKKFPFFRGSYTGWRNSVRHNLSLNDCFVKVLRDPSRPWGKDNYWMLNPNSEYTFADGVF
XP_002934447
Forkhead
111
201
KPPYSYIALIAMAIKDSASGRLTLAEINDYLMKKFPFFRGSYTGWRNSVRHNLSLNDCFVKVLRDPSRPWGKDNYWMLNPNSEYTFADGVF
Links
Other
Forkhead
family TFs
Other
Xenopus tropicalis
TFs
42 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ENSLOCG00000012990
Lepisosteus oculatus
ENSLOCG00000012990
I
0.816
ENSONIG00000006405
Oreochromis niloticus
ENSONIG00000006405
I
0.804
foxq1b
Gasterosteus aculeatus
ENSGACG00000005009
I
0.804
ENSPFOG00000020964
Poecilia formosa
ENSPFOG00000020964
I
0.804
foxq1b
Takifugu rubripes
ENSTRUG00000001789
I
0.804
ENSXMAG00000019810
Xiphophorus maculatus
ENSXMAG00000019810
I
0.804
ENSAMXG00000006160
Astyanax mexicanus
ENSAMXG00000006160
I
0.804
ENSAMXG00000013180
Astyanax mexicanus
ENSAMXG00000013180
I
0.804
ENSGMOG00000020500
Gadus morhua
ENSGMOG00000020500
I
0.796
foxq1a
Danio rerio
ENSDARG00000030896
I
0.792
ENSGMOG00000017063
Gadus morhua
ENSGMOG00000017063
I
0.792
ENSONIG00000021432
Oreochromis niloticus
ENSONIG00000021432
I
0.787
Foxq1
Mus musculus
ENSMUSG00000038415
D
0.786
FOXQ1
Pteropus vampyrus
ENSPVAG00000015362
I
0.786
FOXQ1_RAT
Rattus norvegicus
FOXQ1_RAT
D
0.786
ENSSHAG00000012341
Sarcophilus harrisii
ENSSHAG00000012341
I
0.786
FOXQ1
Monodelphis domestica
ENSMODG00000008316
I
0.786
FOXQ1
Pan troglodytes
ENSPTRG00000029883
I
0.786
ENSMPUG00000018966
Mustela putorius furo
ENSMPUG00000018966
I
0.786
FOXQ1
Homo sapiens
ENSG00000164379
D
0.786
ENSCSAG00000019113
Chlorocebus sabaeus
ENSCSAG00000019113
I
0.786
ENSMEUG00000009518
Macropus eugenii
ENSMEUG00000009518
I
0.786
FOXQ1
Erinaceus europaeus
ENSEEUG00000009057
I
0.786
FOXQ1
Loxodonta africana
ENSLAFG00000000082
I
0.779
ENSPMAG00000004942
Petromyzon marinus
ENSPMAG00000004942
I
0.774
Myotis_brandtii_Foxq1_10020361
Myotis brandtii
Myotis_brandtii_Foxq1_10020361
I
0.773
ENSPFOG00000020363
Poecilia formosa
ENSPFOG00000020363
I
0.772
ENSCSAVG00000006732
Ciona savignyi
ENSCSAVG00000006732
I
0.769
foxq
Ciona intestinalis
ENSCING00000019322
I
0.768
foxq1b
Danio rerio
ENSDARG00000055395
I
0.767
ENSLACG00000001296
Latimeria chalumnae
ENSLACG00000001296
I
0.765
CapteG175391
Capitella teleta
CapteG175391
I
0.760
estExt_gwp.C_60230
Branchiostoma floridae
estExt_gwp.C_60230
I
0.756
Sakowv30035367m.g
Saccoglossus kowalevskii
Sakowv30035367m.g
I
0.755
ENSETEG00000003274
Echinops telfairi
ENSETEG00000003274
I
0.752
ENSPMAG00000004457
Petromyzon marinus
ENSPMAG00000004457
I
0.735
SPU_019345
Strongylocentrotus purpuratus
SPU_019345
I
0.734
SNAPOd2T00026236001
Oikopleura dioica
SNAPOd2T00026236001
I
0.730
TriadG30486
Trichoplax adhaerens
TriadG30486
I
0.706
DAPPUDRAFT_17917
Daphnia pulex
DAPPUDRAFT_17917
I
0.676
NEMVEDRAFT_v1g201028
Nematostella vectensis
NEMVEDRAFT_v1g201028
N
0.667