CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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18607_YNL068C
(
Saccharomyces mikatae
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
18607_YNL068C
T189765_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FKH2
M00045_2.00
Saccharomyces cerevisiae
GTAAACAH
DTGTTTAC
PBM
Badis et al.(2008)
FKH2_4517
0.843
0.988
FKH2
M01542_2.00
Saccharomyces cerevisiae
NNVWMAAYAN
NTRTTKWBNN
PBM
Zhu et al.(2009)
Fkh2
0.843
0.988
FKH2
M07474_2.00
Saccharomyces cerevisiae
GTAAACA
TGTTTAC
PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0297.1
0.843
0.988
FKH2
M08556_2.00
Saccharomyces cerevisiae
NNNNDNGTAAACAAANNNDV
BHNNNTTTGTTTACNHNNNN
Misc
DeBoer et al.(2011)
YNL068C_830
0.843
0.988
FKH1
M01541_2.00
Saccharomyces cerevisiae
NNRTMAAYAN
NTRTTKAYNN
PBM
Zhu et al.(2009)
Fkh1
0.729
0.721
FKH1
M08555_2.00
Saccharomyces cerevisiae
NNGTAAACADVN
NBHTGTTTACNN
Misc
DeBoer et al.(2011)
YIL131C_2002
0.729
0.721
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
18607_YNL068C
Forkhead
339
428
KPPHSYATMITQAILSSPEGVISLADIYKYISSNYAYYRFAKSGWQNSIRHNLSLNKAFEKVPRRPNEPGKGMKWRISESYQQDFLSKWN
Links
Other
Forkhead
family TFs
Other
Saccharomyces mikatae
TFs
178 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy