CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_kg.C_scaffold_461000019
(
Phytophthora capsici
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
fgenesh1_kg.C_scaffold_461000019
T189787_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_kg.C_scaffold_461000019
Forkhead
228
308
KPVASVTYGDMISHALAVLPGGKGSFKEICDFVETEYESQLNWKLESDQRKSPVWKSSVRKILFSNTRFRKHPESKGMFCL
Links
Other
Forkhead
family TFs
Other
Phytophthora capsici
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Physo128126
Phytophthora sojae
Physo128126
N
0.904
F443_04774
Phytophthora parasitica
F443_04774
N
0.897
Phyra78585
Phytophthora ramorum
Phyra78585
N
0.842
fgenesh_scip_prom.28083.8606
Phytophthora lateralis
fgenesh_scip_prom.28083.8606
N
0.842
maker-pve_contig_41-fgenesh-gene-0.12
Pythium vexans
maker-pve_contig_41-fgenesh-gene-0.12
N
0.834
maker-par_contig_744-snap-gene-0.10
Pythium arrhenomanes
maker-par_contig_744-snap-gene-0.10
N
0.829
PITG_12527
Phytophthora infestans
PITG_12527
N
0.813
PYU1_G014720
Pythium ultimum
PYU1_G014720
N
0.794
maker-pir_contig_1252-snap-gene-0.4
Pythium irregulare
maker-pir_contig_1252-snap-gene-0.4
N
0.794
maker-pag1_scaffold_419-snap-gene-0.16
Pythium aphanidermatum
maker-pag1_scaffold_419-snap-gene-0.16
N
0.794
fgenesh_scip_prom.46568.6759
Phytophthora kernoviae
fgenesh_scip_prom.46568.6759
N
0.771
ALNC14_033870
Albugo laibachii
ALNC14_033870
N
0.764
maker-piw_contig_1130-snap-gene-0.10
Pythium iwayamai
maker-piw_contig_1130-snap-gene-0.10
N
0.723