CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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fgenesh1_pg.C_scaffold_4000918
(
Cryphonectria parasitica
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
fgenesh1_pg.C_scaffold_4000918
T189789_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU08634
M01993_2.00
Neurospora crassa
NNRCAAACAN
NTGTTTGYNN
PBM
Weirauch et al.(2014)
pTH9730
0.739
0.628
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
fgenesh1_pg.C_scaffold_4000918
Forkhead
268
373
KIDLPYAQLIYRAFMSRDTRSMTLQEMYQWFRENTDKAKSPGKGWMNSIRHNLSMNQAFVKRNAKAATRNRDGSLSFDIDAPGVDSRKSTEWFLHPDFERGVISTT
Links
Other
Forkhead
family TFs
Other
Cryphonectria parasitica
TFs
20 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
VDAG_06269
Verticillium dahliae
VDAG_06269
I
0.769
CTHT_0074260
Chaetomium thermophilum
CTHT_0074260
I
0.749
PFICI_03083
Pestalotiopsis fici
PFICI_03083
I
0.740
NCU08634
Neurospora crassa
NCU08634
D
0.739
NEUTE1DRAFT_127029
Neurospora tetrasperma
NEUTE1DRAFT_127029
I
0.739
CHGG_02048
Chaetomium globosum
CHGG_02048
I
0.739
VDBG_09975
Verticillium alfalfae
VDBG_09975
I
0.729
VDBG_09975
Verticillium albo atrum
VDBG_09975
I
0.729
MYCTH_2307931
Myceliophthora thermophila
MYCTH_2307931
I
0.729
SMAC_09090
Sordaria macrospora
SMAC_09090
I
0.705
estExt_fgenesh3_pm.C_40010
Neurospora discreta
estExt_fgenesh3_pm.C_40010
I
0.704
PODANS_1_230
Podospora anserina
PODANS_1_230
I
0.688
SAPIO_CDS1284
Scedosporium apiospermum
SAPIO_CDS1284
I
0.686
MGU_09664
Metarhizium guizhouense
MGU_09664
I
0.683
MBR_00157
Metarhizium brunneum
MBR_00157
I
0.683
X797_002511
Metarhizium robertsii
X797_002511
I
0.683
MAJ_05920
Metarhizium majus
MAJ_05920
I
0.683
MANI_000381
Metarhizium anisopliae
MANI_000381
I
0.683
MAC_05493
Metarhizium acridum
MAC_05493
I
0.683
UV8b_5959
Ustilaginoidea virens
UV8b_5959
I
0.677