CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ALUE_0000375501
(
Ascaris lumbricoides
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
ALUE_0000375501
T190251_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
CBG14280
M01974_2.00
Caenorhabditis briggsae
RTAAACAN
NTGTTTAY
PBM
Weirauch et al.(2014)
pTH6734
0.666
0.535
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ALUE_0000375501-mRNA-1
Forkhead
20
109
KPNLSYSQLIKMAIENSPEKRCTLSEIYSYIMSNYPYYRMHANPSWKNSIRHNLSLNKQFIRESRDIGDIGKGSYWRCVPPDENLKARRY
Links
Other
Forkhead
family TFs
Other
Ascaris lumbricoides
TFs
136 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy