csin105615 (Clonorchis sinensis)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00250 (Forkhead) IPR001766 csin105615 T190390_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q2L6N7_PELSI
M01990_2.00 		Trionyx sinensis
KTRTTTACA
TGTAAAYAM		 PBM
Weirauch et al.(2014)
pTH5334 		0.667 0.616
FOXA1
M04817_2.00 		Homo sapiens
NTRTKTACMYWN
NWRKGTAMAYAN		 SELEX
Yin et al.(2017)
FOXA1_eDBD_HT-SELEX 		0.665 0.651
FOXA1
M04819_2.00 		Homo sapiens
BVYTAWGTAAACAAWN
NWTTGTTTACWTARBV		 SELEX
Yin et al.(2017)
FOXA1_FL_HT-SELEX_1 		0.665 0.651
FOXA1
M04820_2.00 		Homo sapiens
HWRWRYAAATATTKACWYWR
YWRWGTMAATATTTRYWYWD		 SELEX
Yin et al.(2017)
FOXA1_FL_HT-SELEX_2 		0.665 0.651
FOXA1
M08117_2.00 		Homo sapiens
NNNNTRTTTACWYWD
HWRWGTAAAYANNNN		 ChIP-seq
Mathelier et al.(2014)
MA0148.3 		0.665 0.651
FOXA1
M07960_2.00 		Homo sapiens
NNYWRWGYAAACANN
NNTGTTTRCWYWRNN		 ChIP-seq
Gerstein et al.(2012)
ECC-1_FOXA1_HudsonAlpha 		0.665 0.651
FOXA1
M07961_2.00 		Homo sapiens
HWRWGTAAAYA
TRTTTACWYWD		 ChIP-seq
Gerstein et al.(2012)
HepG2_FOXA1_HudsonAlpha 		0.665 0.651
FOXA1
M07962_2.00 		Homo sapiens
NWVWGTAAACA
TGTTTACWBWN		 ChIP-seq
Gerstein et al.(2012)
T-47D_FOXA1_HudsonAlpha 		0.665 0.651
FOXA1
M08199_2.00 		Homo sapiens
BWRDGTAAACANN
NNTGTTTACHYWV		 ChIP-seq
Contrino et al.(2012)
Mv69 		0.665 0.651
FOXA1
M08028_2.00 		Homo sapiens
WRWRYAAAYA
TRTTTRYWYW		 ChIP-seq
Chen et al.(2011)
GSE15244_FoxA1 		0.665 0.651
FOXA1
M09090_2.00 		Homo sapiens
VHWRWGTAAACA
TGTTTACWYWDB		 Misc
Kulakovskiy et al.(2013)
FOXA1_HUMAN.H11MO.0.A 		0.665 0.651
Foxa1
M09103_2.00 		Mus musculus
TRTTKACWYW
WRWGTMAAYA		 Misc
Kulakovskiy et al.(2013)
FOXA1_MOUSE.H11MO.0.A 		0.665 0.651
FOXA1
M09544_2.00 		Homo sapiens
WGCCAARRYAAAYANN
NNTRTTTRYYTTGGCW		 Misc
Heinz et al.(2010)
LNCAP-FOXA1_GSE27824_2 		0.665 0.651
FOXA1
M09543_2.00 		Homo sapiens
WRWGTAAACA
TGTTTACWYW		 Misc
Heinz et al.(2010)
LNCAP-FOXA1_GSE27824_1 		0.665 0.651
FOXA1
M09545_2.00 		Homo sapiens
WRWGTAAAYA
TRTTTACWYW		 Misc
Heinz et al.(2010)
MCF7-FOXA1_GSE26831 		0.665 0.651
FOXA1
M10542_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXA1_02 		0.665 0.651
FOXA1
M10543_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$FOXA1_03 		0.665 0.651
FOXA1
M10544_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF3A_01 		0.665 0.651
FOXA1
M10545_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF3ALPHA_Q6 		0.665 0.651
FOXA1
M10546_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$HNF3A_Q6 		0.665 0.651
FOXA1
M04818_2.00 		Homo sapiens
NWRDGYMAAYAW
WTRTTKRCHYWN		 SELEX
Yin et al.(2017)
FOXA1_eDBD_Methyl-HT-SELEX 		0.665 0.651
FOXA1
M04821_2.00 		Homo sapiens
BVYTAWGTAAACAAWV
BWTTGTTTACWTARBV		 SELEX
Yin et al.(2017)
FOXA1_FL_Methyl-HT-SELEX_1 		0.665 0.651
FOXA1
M04822_2.00 		Homo sapiens
YTRWRYAAATATTTACWYAR
YTRWGTAAATATTTRYWYAR		 SELEX
Yin et al.(2017)
FOXA1_FL_Methyl-HT-SELEX_2 		0.665 0.651
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
csin105615 Forkhead 326 415

Links

Other Forkhead family TFs
Other Clonorchis sinensis TFs

94 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
T265_08863 Opisthorchis viverrini T265_08863 I 0.932
ECPE_0000936301 Echinostoma caproni ECPE_0000936301 N 0.888
SCUD_0000195401 Schistosoma curassoni SCUD_0000195401 N 0.867
SROB_0001069101 Schistosoma rodhaini SROB_0001069101 N 0.867
SMRZ_0002246801 Schistosoma margrebowiei SMRZ_0002246801 N 0.867
Smp_098780 Schistosoma mansoni Smp_098780 N 0.867
A_01907 Schistosoma haematobium A_01907 N 0.867
EmuJ_000217500 Echinococcus multilocularis EmuJ_000217500 N 0.827
MCOS_0000774901 Mesocestoides corti MCOS_0000774901 N 0.827
HDID_0000136701 Hymenolepis diminuta HDID_0000136701 N 0.827
TTAC_0000041401 Hydatigera taeniaeformis TTAC_0000041401 N 0.827
TsM_001176500 Taenia solium TsM_001176500 N 0.827
TASK_0000624801 Taenia asiatica TASK_0000624801 N 0.827
HmN_000727400 Hymenolepis microstoma HmN_000727400 N 0.826
CRE31308 Caenorhabditis remanei CRE31308 N 0.754
CRE08474 Caenorhabditis remanei CRE08474 N 0.738
ENSCSAVG00000011291 Ciona savignyi ENSCSAVG00000011291 I 0.699
foxa-a Ciona intestinalis ENSCING00000022098 I 0.698
ENSCSAVG00000004649 Ciona savignyi ENSCSAVG00000004649 I 0.698
ENSAMXG00000008595 Astyanax mexicanus ENSAMXG00000008595 I 0.685
foxa2 Danio rerio ENSDARG00000003411 I 0.684
ENSGMOG00000017852 Gadus morhua ENSGMOG00000017852 I 0.683
Ocbimv22006019m.g Octopus bimaculoides Ocbimv22006019m.g I 0.681
ENSONIG00000008136 Oreochromis niloticus ENSONIG00000008136 I 0.681
foxa2 Takifugu rubripes ENSTRUG00000008187 I 0.681
foxa2 Tetraodon nigroviridis ENSTNIG00000016890 I 0.681
ENSLACG00000008212 Latimeria chalumnae ENSLACG00000008212 I 0.680
foxa2 Oryzias latipes ENSORLG00000017407 I 0.680
foxa2 Gasterosteus aculeatus ENSGACG00000006986 I 0.680
ENSPFOG00000003245 Poecilia formosa ENSPFOG00000003245 I 0.680
ENSGMOG00000018910 Gadus morhua ENSGMOG00000018910 I 0.680
ENSXMAG00000016270 Xiphophorus maculatus ENSXMAG00000016270 I 0.680
tetur14g02480 Tetranychus urticae tetur14g02480 I 0.668
Q2L6N7_PELSI Trionyx sinensis Q2L6N7_PELSI D 0.667
HMEL017967 Heliconius melpomene HMEL017967 I 0.666
L798_14202 Zootermopsis nevadensis L798_14202 I 0.666
KGM_03634 Danaus plexippus KGM_03634 I 0.666
BGIBMGA005101 Bombyx mori BGIBMGA005101 I 0.666
ENSLACG00000012599 Latimeria chalumnae ENSLACG00000012599 I 0.666
CLEC001132 Cimex lectularius CLEC001132 I 0.666
foxa1.S Xenopus laevis XB-GENE-6256649 I 0.666
ENSCING00000023488 Ciona intestinalis ENSCING00000023488 I 0.666
Hsal_05933--XP_394770.3_APIME Harpegnathos saltator Hsal_05933--XP_394770.3_APIME I 0.666
HHAL004914-PA Halyomorpha halys HHAL004914-PA I 0.666
FOXA1 Tursiops truncatus ENSTTRG00000002855 I 0.665
ENSP00000315955-D2 Bos grunniens ENSP00000315955-D2 I 0.665
foxa1 Takifugu rubripes ENSTRUG00000006136 I 0.665
Cmyd_10014568 Chelonia mydas Cmyd_10014568 I 0.665
ENSVPAG00000009933 Vicugna pacos ENSVPAG00000009933 I 0.665
foxa1 Tetraodon nigroviridis ENSTNIG00000002587 I 0.665
Gfo_R012942 Geospiza fortis Gfo_R012942 I 0.665
Aan_R005715 Calypte anna Aan_R005715 I 0.665
foxa1 Xenopus tropicalis XB-GENE-487352 I 0.665
ENSXMAG00000018285 Xiphophorus maculatus ENSXMAG00000018285 I 0.665
Ogr19511 Ophisaurus gracilis Ogr19511 I 0.665
ENSPFOG00000009082 Poecilia formosa ENSPFOG00000009082 I 0.665
foxa1 Gasterosteus aculeatus ENSGACG00000004306 I 0.665
FOXA1 Homo sapiens ENSG00000129514 D 0.665
FOXA1 Felis catus ENSFCAG00000028305 I 0.665
FOXA1 Gorilla gorilla ENSGGOG00000022617 I 0.665
FOXA1 Loxodonta africana ENSLAFG00000000062 I 0.665
ENSMEUG00000000643 Macropus eugenii ENSMEUG00000000643 I 0.665
ENSLOCG00000009382 Lepisosteus oculatus ENSLOCG00000009382 I 0.665
FOXA2 Loxodonta africana ENSLAFG00000026345 I 0.665
ENSFALG00000006161 Ficedula albicollis ENSFALG00000006161 I 0.665
FOXA1 Dasypus novemcinctus ENSDNOG00000032245 I 0.665
ENSAMXG00000000305 Astyanax mexicanus ENSAMXG00000000305 I 0.665
ENSAMEG00000008009 Ailuropoda melanoleuca ENSAMEG00000008009 I 0.665
FOXA1 Anolis carolinensis ENSACAG00000001256 I 0.665
FOXA1 Bos taurus ENSBTAG00000013888 I 0.665
FOXA1 Canis familiaris ENSCAFG00000013743 I 0.665
foxa1 Danio rerio ENSDARG00000102138 I 0.665
ENSCSAG00000015444 Chlorocebus sabaeus ENSCSAG00000015444 I 0.665
ENSCPOG00000026606 Cavia porcellus ENSCPOG00000026606 I 0.665
ENSMICG00000003135 Microcebus murinus ENSMICG00000003135 I 0.665
FOXA1 Myotis lucifugus ENSMLUG00000029779 I 0.665
FOXA1 Pan troglodytes ENSPTRG00000006285 I 0.665
ENSPSIG00000011490 Pelodiscus sinensis ENSPSIG00000011490 I 0.665
ENSPPYG00000005758 Pongo abelii ENSPPYG00000005758 I 0.665
FOXA1 Pteropus vampyrus ENSPVAG00000014588 I 0.665
Foxa1 Rattus norvegicus ENSRNOG00000009284 I 0.665
ENSSSCG00000001940 Sus scrofa ENSSSCG00000001940 I 0.665
ENSSHAG00000001593 Sarcophilus harrisii ENSSHAG00000001593 I 0.665
FOXA1 Sorex araneus ENSSARG00000008208 I 0.665
ENSPANG00000015153 Papio anubis ENSPANG00000015153 I 0.665
foxa1 Oryzias latipes ENSORLG00000019506 I 0.665
ENSMPUG00000016255 Mustela putorius furo ENSMPUG00000016255 I 0.665
ENSMODG00000012030 Monodelphis domestica ENSMODG00000012030 I 0.665
FOXA1 Macaca mulatta ENSMMUG00000009653 I 0.665
Foxa1 Mus musculus ENSMUSG00000035451 D 0.665
ENSOARG00000008192 Ovis aries ENSOARG00000008192 I 0.665
ENSONIG00000011782 Oreochromis niloticus ENSONIG00000011782 I 0.665
FOXA1 Otolemur garnettii ENSOGAG00000031319 I 0.665
ENSSTOG00000023537 Ictidomys tridecemlineatus ENSSTOG00000023537 I 0.665