GPLIN_001276900 (Globodera pallida)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00250 (Forkhead) IPR001766 GPLIN_001276900 T190557_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
daf-16
M10574_2.00
Caenorhabditis elegans
RNHGTAAACAANHN

NDNTTGTTTACDNY
Transfac
Matys et al.(2006)
N$DAF16_01
0.786 0.892
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GPLIN_001276900 Forkhead 198 287

Links

Other Forkhead family TFs
Other Globodera pallida TFs

28 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
daf-16 Caenorhabditis elegans WBGene00000912 D 0.786
CRE28480 Caenorhabditis remanei CRE28480 I 0.785
L892_g28207 Steinernema scapterisci L892_g28207 I 0.784
SMUV_0000148401 Syphacia muris SMUV_0000148401 I 0.778
RSKR_0000006600 Rhabditophanes kr3021 RSKR_0000006600 I 0.773
snap_masked-nMf.1.1.scaf25582-processed-gene-0.1 Meloidogyne floridensis snap_masked-nMf.1.1.scaf25582-processed-gene-0.1 I 0.771
nDi.2.2.2.g01961 Dirofilaria immitis nDi.2.2.2.g01961 I 0.756
nOo.2.0.1.g05753 Onchocerca ochengi nOo.2.0.1.g05753 I 0.756
OFLC_0000193701 Onchocerca flexuosa OFLC_0000193701 I 0.756
Bm5392 Brugia malayi Bm5392 I 0.756
nOo.2.0.1.g07140 Onchocerca ochengi nOo.2.0.1.g07140 I 0.756
WUBG_10392 Wuchereria bancrofti WUBG_10392 I 0.756
BTMF_0000986201 Brugia timori BTMF_0000986201 I 0.756
WBGene00237302 Onchocerca volvulus WBGene00237302 I 0.756
ALUE_0000559201 Ascaris lumbricoides ALUE_0000559201 I 0.753
TCNE_0000984601 Toxocara canis TCNE_0000984601 I 0.753
ASU_05583 Ascaris suum ASU_05583 I 0.753
ACOC_0001009801 Angiostrongylus costaricensis ACOC_0001009801 I 0.752
PTRK_0000872800 Parastrongyloides trichosuri PTRK_0000872800 I 0.751
L596_g21623 Steinernema carpocapsae L596_g21623 I 0.751
SPAL_0000140300 Strongyloides papillosus SPAL_0000140300 I 0.751
L889_g26642 Steinernema feltiae L889_g26642 I 0.751
SVE_0221800 Strongyloides venezuelensis SVE_0221800 I 0.751
L893_g8649 Steinernema glaseri L893_g8649 I 0.751
MhA1_Contig353.frz3.fgene4 Meloidogyne hapla MhA1_Contig353.frz3.fgene4 I 0.743
nLs.2.1.2.g00563 Litomosoides sigmodontis nLs.2.1.2.g00563 I 0.693
nAv.1.0.1.g02965 Acanthocheilonema viteae nAv.1.0.1.g02965 I 0.686
TCLT_0000249001 Thelazia callipaeda TCLT_0000249001 I 0.681