CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
HPLM_0000786501
(
Haemonchus placei
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
HPLM_0000786501
T190658_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
lin-31
M00665_2.00
Caenorhabditis elegans
NWRTAAAYANN
NNTRTTTAYWN
PBM
Narasimhan et al.(2015)
pTH9116
0.808
0.767
Foxb1
M01983_2.00
Mus musculus
TRTTKAYWYW
WRWRTMAAYA
PBM
Weirauch et al.(2014)
pTH2808
0.738
0.733
FOXB1
M03028_2.00
Homo sapiens
GAATGACACRGCKV
BMGCYGTGTCATTC
SELEX
Jolma et al.(2013)
FOXB1_1
0.738
0.733
FOXB1
M03029_2.00
Homo sapiens
WRWGTMAATATTKACWYW
WRWGTMAATATTKACWYW
SELEX
Jolma et al.(2013)
FOXB1_2
0.738
0.733
FOXB1
M03030_2.00
Homo sapiens
WTRTTKACWTW
WAWGTMAAYAW
SELEX
Jolma et al.(2013)
FOXB1_3
0.738
0.733
FOXB1
M03031_2.00
Homo sapiens
NTRTTTACW
WGTAAAYAN
SELEX
Jolma et al.(2013)
FOXB1_4
0.738
0.733
FOXB1
M04837_2.00
Homo sapiens
NWRDGYMAATATTKRCWYWD
HWRWGYMAATATTKRCHYWN
SELEX
Yin et al.(2017)
FOXB1_eDBD_HT-SELEX
0.738
0.733
FOXB1
M04838_2.00
Homo sapiens
NWRNGYMAATATTKRCDYWD
HWRHGYMAATATTKRCNYWN
SELEX
Yin et al.(2017)
FOXB1_eDBD_Methyl-HT-SELEX
0.738
0.733
fd96Ca
M03743_2.00
Drosophila melanogaster
WRWGYMAATATTKRCWYW
WRWGYMAATATTKRCWYW
SELEX
Nitta et al.(2015)
fd96Ca_1
0.731
0.709
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
HPLM_0000786501-mRNA-1
Forkhead
42
129
KPPYSYIWLTYMAIQNSEEKMLPLTEIYKFIMDKFPFYRKNTQRWQNSLRHNLSFNDCFIKIPRRPDRPGKVGNHRTIQMYEKLIEMQ
Links
Other
Forkhead
family TFs
Other
Haemonchus placei
TFs
208 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy