L596_g12824 (Steinernema carpocapsae)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00250 (Forkhead) IPR001766 L596_g12824 T190674_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Foxa2
M00162_2.00
Mus musculus
GTAAAYAW

WTRTTTAC
PBM
Badis et al.(2009)
Foxa2_2830
0.809 0.872
FOXA2
M04815_2.00
Homo sapiens
NHVNRYMAATATTKACNNDN

NHNNGTMAATATTKRYNBDN
SELEX
Yin et al.(2017)
FOXA2_eDBD_HT-SELEX
0.809 0.872
Foxa2
M08121_2.00
Mus musculus
TRTTTACWYWDN

NHWRWGTAAAYA
ChIP-seq
Mathelier et al.(2014)
MA0047.2
0.809 0.872
FOXA2
M07959_2.00
Homo sapiens
NNWRWGYAAAYANNN

NNNTRTTTRCWYWNN
ChIP-seq
Gerstein et al.(2012)
HepG2_FOXA2_HudsonAlpha
0.791 0.826
FOXA2
M09088_2.00
Homo sapiens
NHWRWGTAAACA

TGTTTACWYWDN
Misc
Kulakovskiy et al.(2013)
FOXA2_HUMAN.H11MO.0.A
0.791 0.826
Foxa2
M09104_2.00
Mus musculus
BNHTRTTKACWYW

WRWGTMAAYADNV
Misc
Kulakovskiy et al.(2013)
FOXA2_MOUSE.H11MO.0.A
0.791 0.826
FOXA2
M09542_2.00
Homo sapiens
WVWGTMAACANV

BNTGTTKACWBW
Misc
Heinz et al.(2010)
Liver-Foxa2_GSE25694
0.809 0.872
FOXA2
M10540_2.00
Homo sapiens
WAARYAAAYADKNMV

BKNMHTRTTTRYTTW
Transfac
Matys et al.(2006)
V$HNF3B_01
0.809 0.872
FOXA2
M10541_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF3B_Q6
0.809 0.872
AAA20679
M10575_2.00
Xenopus laevis
WNWGTMAACAWWMW

WKWWTGTTKACWNW
Transfac
Matys et al.(2006)
V$XFD3_01
0.809 0.872
FOXA2
M04816_2.00
Homo sapiens
NWRNRYMAATATTKACWNWN

NWNWGTMAATATTKRYNYWN
SELEX
Yin et al.(2017)
FOXA2_eDBD_Methyl-HT-SELEX
0.809 0.872
fkh
M03734_2.00
Drosophila melanogaster
WRWGYMAATATTKRCWYW

WRWGYMAATATTKRCWYW
SELEX
Nitta et al.(2015)
fkh_1
0.781 0.802
fkh
M03735_2.00
Drosophila melanogaster
HWASAATAAYAWT

AATRTTATTSTWD
SELEX
Nitta et al.(2015)
fkh_2
0.781 0.802
fkh
M06473_2.00
Drosophila melanogaster
NTRDDYAAACA

TGTTTRHHYAN
B1H
Mathelier et al.(2014)
MA0446.1
0.781 0.802
fkh
M06194_2.00
Drosophila melanogaster
NTRDDYAAACA

TGTTTRHHYAN
B1H
Zhu et al.(2011)
fkh_NAR_FBgn0000659
0.800 0.849
fkh
M08200_2.00
Drosophila melanogaster
NTRDDYAAACA

TGTTTRHHYAN
ChIP-seq
Contrino et al.(2012)
Mf15
0.800 0.849
fkh
M09668_2.00
Drosophila melanogaster
TRTTTRCAHAAG

CTTDTGYAAAYA
Misc
Kulakovskiy et al.(2009)
fkh
0.800 0.849
FOXA1
M04817_2.00
Homo sapiens
NTRTKTACMYWN

NWRKGTAMAYAN
SELEX
Yin et al.(2017)
FOXA1_eDBD_HT-SELEX
0.784 0.860
FOXA1
M04819_2.00
Homo sapiens
BVYTAWGTAAACAAWN

NWTTGTTTACWTARBV
SELEX
Yin et al.(2017)
FOXA1_FL_HT-SELEX_1
0.784 0.860
FOXA1
M04820_2.00
Homo sapiens
HWRWRYAAATATTKACWYWR

YWRWGTMAATATTTRYWYWD
SELEX
Yin et al.(2017)
FOXA1_FL_HT-SELEX_2
0.765 0.814
FOXA1
M08117_2.00
Homo sapiens
NNNNTRTTTACWYWD

HWRWGTAAAYANNNN
ChIP-seq
Mathelier et al.(2014)
MA0148.3
0.765 0.814
FOXA1
M07960_2.00
Homo sapiens
NNYWRWGYAAACANN

NNTGTTTRCWYWRNN
ChIP-seq
Gerstein et al.(2012)
ECC-1_FOXA1_HudsonAlpha
0.765 0.814
FOXA1
M07961_2.00
Homo sapiens
HWRWGTAAAYA

TRTTTACWYWD
ChIP-seq
Gerstein et al.(2012)
HepG2_FOXA1_HudsonAlpha
0.784 0.860
FOXA1
M07962_2.00
Homo sapiens
NWVWGTAAACA

TGTTTACWBWN
ChIP-seq
Gerstein et al.(2012)
T-47D_FOXA1_HudsonAlpha
0.784 0.860
FOXA1
M08199_2.00
Homo sapiens
BWRDGTAAACANN

NNTGTTTACHYWV
ChIP-seq
Contrino et al.(2012)
Mv69
0.784 0.860
FOXA1
M08028_2.00
Homo sapiens
WRWRYAAAYA

TRTTTRYWYW
ChIP-seq
Chen et al.(2011)
GSE15244_FoxA1
0.784 0.860
FOXA1
M09090_2.00
Homo sapiens
VHWRWGTAAACA

TGTTTACWYWDB
Misc
Kulakovskiy et al.(2013)
FOXA1_HUMAN.H11MO.0.A
0.784 0.860
Foxa1
M09103_2.00
Mus musculus
TRTTKACWYW

WRWGTMAAYA
Misc
Kulakovskiy et al.(2013)
FOXA1_MOUSE.H11MO.0.A
0.765 0.814
FOXA1
M09544_2.00
Homo sapiens
WGCCAARRYAAAYANN

NNTRTTTRYYTTGGCW
Misc
Heinz et al.(2010)
LNCAP-FOXA1_GSE27824_2
0.765 0.814
FOXA1
M09543_2.00
Homo sapiens
WRWGTAAACA

TGTTTACWYW
Misc
Heinz et al.(2010)
LNCAP-FOXA1_GSE27824_1
0.765 0.814
FOXA1
M09545_2.00
Homo sapiens
WRWGTAAAYA

TRTTTACWYW
Misc
Heinz et al.(2010)
MCF7-FOXA1_GSE26831
0.784 0.860
FOXA1
M10542_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXA1_02
0.784 0.860
FOXA1
M10543_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXA1_03
0.784 0.860
FOXA1
M10544_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF3A_01
0.784 0.860
FOXA1
M10545_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF3ALPHA_Q6
0.784 0.860
FOXA1
M10546_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF3A_Q6
0.765 0.814
FOXA1
M04818_2.00
Homo sapiens
NWRDGYMAAYAW

WTRTTKRCHYWN
SELEX
Yin et al.(2017)
FOXA1_eDBD_Methyl-HT-SELEX
0.765 0.814
FOXA1
M04821_2.00
Homo sapiens
BVYTAWGTAAACAAWV

BWTTGTTTACWTARBV
SELEX
Yin et al.(2017)
FOXA1_FL_Methyl-HT-SELEX_1
0.765 0.814
FOXA1
M04822_2.00
Homo sapiens
YTRWRYAAATATTTACWYAR

YTRWGTAAATATTTRYWYAR
SELEX
Yin et al.(2017)
FOXA1_FL_Methyl-HT-SELEX_2
0.784 0.860
FOXA3
M04831_2.00
Homo sapiens
BVYTAWGTAAACAAAN

NTTTGTTTACWTARBV
SELEX
Yin et al.(2017)
FOXA3_FL_HT-SELEX_1
0.775 0.837
FOXA3
M04832_2.00
Homo sapiens
HWRWGYAAATATTKACWYWD

HWRWGTMAATATTTRCWYWD
SELEX
Yin et al.(2017)
FOXA3_FL_HT-SELEX_2
0.775 0.837
FOXA3
M09096_2.00
Homo sapiens
HWRWGTMAAYADN

NHTRTTKACWYWD
Misc
Kulakovskiy et al.(2013)
FOXA3_HUMAN.H11MO.0.B
0.775 0.837
Foxa3
M09106_2.00
Mus musculus
HWRWGTMAAYADN

NHTRTTKACWYWD
Misc
Kulakovskiy et al.(2013)
FOXA3_MOUSE.H11MO.0.A
0.775 0.837
FOXA3
M10557_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$HNF3G_Q4
0.757 0.791
FOXA3
M04833_2.00
Homo sapiens
CVYTAWGTAAACAAWB

VWTTGTTTACWTARBG
SELEX
Yin et al.(2017)
FOXA3_FL_Methyl-HT-SELEX_1
0.757 0.791
FOXA3
M04834_2.00
Homo sapiens
HWRWGYAAATATTKACWYWD

HWRWGTMAATATTTRCWYWD
SELEX
Yin et al.(2017)
FOXA3_FL_Methyl-HT-SELEX_2
0.757 0.791
Q2L6N7_PELSI
M01990_2.00
Trionyx sinensis
KTRTTTACA

TGTAAAYAM
PBM
Weirauch et al.(2014)
pTH5334
0.771 0.802
pha-4
M08123_2.00
Caenorhabditis elegans
WRWGYAAAYA

TRTTTRCWYW
ChIP-seq
Mathelier et al.(2014)
MA0546.1
0.755 0.837
pha-4
M08201_2.00
Caenorhabditis elegans
GTAAACAR

YTGTTTAC
ChIP-seq
Contrino et al.(2012)
Mw164
0.755 0.837
pha-4
M09548_2.00
Caenorhabditis elegans
RYAMAYAN

NTRTKTRY
Misc
Heinz et al.(2010)
cElegans-Embryos-PHA4_modEncode
0.755 0.837
Foxb1
M01983_2.00
Mus musculus
TRTTKAYWYW

WRWRTMAAYA
PBM
Weirauch et al.(2014)
pTH2808
0.705 0.744
FOXB1
M03028_2.00
Homo sapiens
GAATGACACRGCKV

BMGCYGTGTCATTC
SELEX
Jolma et al.(2013)
FOXB1_1
0.688 0.709
FOXB1
M03029_2.00
Homo sapiens
WRWGTMAATATTKACWYW

WRWGTMAATATTKACWYW
SELEX
Jolma et al.(2013)
FOXB1_2
0.688 0.709
FOXB1
M03030_2.00
Homo sapiens
WTRTTKACWTW

WAWGTMAAYAW
SELEX
Jolma et al.(2013)
FOXB1_3
0.688 0.709
FOXB1
M03031_2.00
Homo sapiens
NTRTTTACW

WGTAAAYAN
SELEX
Jolma et al.(2013)
FOXB1_4
0.705 0.744
FOXB1
M04837_2.00
Homo sapiens
NWRDGYMAATATTKRCWYWD

HWRWGYMAATATTKRCHYWN
SELEX
Yin et al.(2017)
FOXB1_eDBD_HT-SELEX
0.705 0.744
FOXB1
M04838_2.00
Homo sapiens
NWRNGYMAATATTKRCDYWD

HWRHGYMAATATTKRCNYWN
SELEX
Yin et al.(2017)
FOXB1_eDBD_Methyl-HT-SELEX
0.705 0.744
fd96Ca
M03743_2.00
Drosophila melanogaster
WRWGYMAATATTKRCWYW

WRWGYMAATATTKRCWYW
SELEX
Nitta et al.(2015)
fd96Ca_1
0.697 0.674
lin-31
M00665_2.00
Caenorhabditis elegans
NWRTAAAYANN

NNTRTTTAYWN
PBM
Narasimhan et al.(2015)
pTH9116
0.687 0.663
FOXC1
M00257_2.00
Homo sapiens
NNNVHHAAYA

TRTTDDBNNN
PBM
Barrera et al.(2016)
FOXC1_REF
0.667 0.698
Foxc1
M01982_2.00
Mus musculus
HNNRHMAAYA

TRTTKDYNND
PBM
Weirauch et al.(2014)
pTH2673
0.667 0.698
FOXC1
M03013_2.00
Homo sapiens
AWRTAAAYAAAYA

TRTTTRTTTAYWT
SELEX
Jolma et al.(2013)
FOXC1_1
0.667 0.698
FOXC1
M03014_2.00
Homo sapiens
NRWMAATATTKWYN

NRWMAATATTKWYN
SELEX
Jolma et al.(2013)
FOXC1_2
0.685 0.709
FOXC1
M03015_2.00
Homo sapiens
WRWRTMAAYAW

WTRTTKAYWYW
SELEX
Jolma et al.(2013)
FOXC1_3
0.685 0.709
Foxc1
M03059_2.00
Mus musculus
RTAAAYAAACA

TGTTTRTTTAY
SELEX
Jolma et al.(2013)
Foxc1_1
0.685 0.709
Foxc1
M03060_2.00
Mus musculus
RTAAACA

TGTTTAY
SELEX
Jolma et al.(2013)
Foxc1_2
0.685 0.709
FOXC1
M09083_2.00
Homo sapiens
SBWAWRTAAACADHN

NDHTGTTTAYWTWVS
Misc
Kulakovskiy et al.(2013)
FOXC1_HUMAN.H11MO.0.C
0.685 0.709
Foxc1
M09111_2.00
Mus musculus
SBWAWRTAAACADHN

NDHTGTTTAYWTWVS
Misc
Kulakovskiy et al.(2013)
FOXC1_MOUSE.H11MO.0.C
0.667 0.698
FOXC1
M10525_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXC1_Q4
0.667 0.698
FOXC1
M10526_2.00
Homo sapiens
TSTTTATTTACDBNVN

NBNVHGTAAATAAASA
Transfac
Matys et al.(2006)
V$FREAC3_01
0.667 0.698
FOXC1
M00253_2.00
Homo sapiens
NNHATAAWHAN

NTDWTTATDNN
PBM
Barrera et al.(2016)
FOXC1_F112S
0.685 0.698
FOXC1
M00255_2.00
Homo sapiens
NRTATATWHNNN

NNNDWATATAYN
PBM
Barrera et al.(2016)
FOXC1_L130F
0.685 0.698
FOXC1
M00256_2.00
Homo sapiens
NNNNWWTYAMAWN

NWTKTRAWWNNNN
PBM
Barrera et al.(2016)
FOXC1_P79L
0.685 0.698
FOXC1
M00258_2.00
Homo sapiens
NNNAMAAYANN

NNTRTTKTNNN
PBM
Barrera et al.(2016)
FOXC1_S131L
0.685 0.698
FOXC1
M00259_2.00
Homo sapiens
RTAAACAW

WTGTTTAY
PBM
Barrera et al.(2016)
FOXC1_S82T
0.685 0.698
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
L596_g12824.t1 Forkhead 163 252
L596_g12824.t2 Forkhead 163 255

Links

Other Forkhead family TFs
Other Steinernema carpocapsae TFs

Invalid Input OrderBy

662 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action