MhA1_Contig163.frz3.gene41 (Meloidogyne hapla)
Forkhead

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00250 (Forkhead) IPR001766 MhA1_Contig163.frz3.gene41 T190794_2.00 WormBase:ParaSite (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
Foxp2
M00792_2.00
Mus musculus
RTAAACAD

HTGTTTAY
PBM
Weirauch et al.(2013)
pTH1288
0.774 0.793
FOXP2
M05866_2.00
Homo sapiens
RTAAAYAWNN

NNWTRTTTAY
SMiLE-seq
Isakova et al.(2017)
FOXP2
0.774 0.793
FOXP2
M08116_2.00
Homo sapiens
NDGTAAACAVN

NBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0593.1
0.774 0.793
FOXP2
M09089_2.00
Homo sapiens
DGTAAACAV

BTGTTTACH
Misc
Kulakovskiy et al.(2013)
FOXP2_HUMAN.H11MO.0.C
0.774 0.793
Foxp2
M09101_2.00
Mus musculus
NGTAAACAN

NTGTTTACN
Misc
Kulakovskiy et al.(2013)
FOXP2_MOUSE.H11MO.0.A
0.774 0.793
FOXP1
M00836_2.00
Homo sapiens
NRTMAACANN

NNTGTTKAYN
PBM
Gabut et al.(2011)
pEX0123
0.756 0.793
FOXP1
M00837_2.00
Homo sapiens
DGTAAACAA

TTGTTTACH
PBM
Gabut et al.(2011)
pEX0124
0.756 0.793
FOXP1
M01976_2.00
Homo sapiens
RTAAACAA

TTGTTTAY
PBM
Weirauch et al.(2014)
pTH5656
0.756 0.793
Foxp1
M00793_2.00
Mus musculus
NRTMAAYAN

NTRTTKAYN
PBM
Weirauch et al.(2013)
pTH3855
0.756 0.793
FOXP1
M04811_2.00
Homo sapiens
NTGTTTRYNRTNNNNNNBNAYRVWMAACAN

NTGTTKWBYRTNVNNNNNNAYNRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_HT-SELEX
0.756 0.793
FOXP1
M08115_2.00
Homo sapiens
NDGTAAACAVNN

NNBTGTTTACHN
ChIP-seq
Mathelier et al.(2014)
MA0481.2
0.756 0.793
FOXP1
M09086_2.00
Homo sapiens
RKAAACAVM

KBTGTTTMY
Misc
Kulakovskiy et al.(2013)
FOXP1_HUMAN.H11MO.0.A
0.756 0.793
FOXP1
M09541_2.00
Homo sapiens
NDGTAAACAVNN

NNBTGTTTACHN
Misc
Heinz et al.(2010)
H9-FOXP1_GSE31006
0.756 0.793
FOXP1
M10536_2.00
Homo sapiens Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$FOXP1_01
0.756 0.793
FOXP1
M04812_2.00
Homo sapiens
NTGTTTRYBRTNNNNNNBNAYRVWMAACAH

DTGTTKWBYRTNVNNNNNNAYVRYAAACAN
SELEX
Yin et al.(2017)
FOXP1_eDBD_Methyl-HT-SELEX
0.756 0.793
FoxP
M03753_2.00
Drosophila melanogaster
AAACAACAACAA

TTGTTGTTGTTT
SELEX
Nitta et al.(2015)
CG16899_1
0.738 0.732
FoxP
M06201_2.00
Drosophila melanogaster
VRTAAACAA

TTGTTTAYB
B1H
Zhu et al.(2011)
CG16899_SANGER_5_FBgn0037735
0.738 0.732
FoxP
M06202_2.00
Drosophila melanogaster
VNNVBBAAAAAAAD

HTTTTTTTVVBNNB
B1H
Zhu et al.(2011)
CG2052_SANGER_2.5_FBgn0039905
0.738 0.732
FoxP
M06203_2.00
Drosophila melanogaster
NNNNNRAAAAAAWNN

NNWTTTTTTYNNNNN
B1H
Zhu et al.(2011)
CG2052_SOLEXA_2.5_FBgn0039905
0.738 0.732
For this family, TFs with SR scores > 0.664 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MhA1_Contig163.frz3.gene41 Forkhead 569 654

Links

Other Forkhead family TFs
Other Meloidogyne hapla TFs

Invalid Input OrderBy

353 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action