CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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nLs.2.1.2.g00563
(
Litomosoides sigmodontis
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
nLs.2.1.2.g00563
T190860_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
daf-16
M10574_2.00
Caenorhabditis elegans
RNHGTAAACAANHN
NDNTTGTTTACDNY
Transfac
Matys et al.(2006)
N$DAF16_01
0.690
0.795
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
nLs.2.1.2.t00563-RA
Forkhead
359
449
GAESYSELISRALKSTFNGRMRLNEIYNWFASNVPYFGSRTSQEQSAGWKNSIRHNLSLHSRFMRIQNEGAGKSSWWVINPDAKPGRNPRR
Links
Other
Forkhead
family TFs
Other
Litomosoides sigmodontis
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy