CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
Home
Tools
View cart
Bulk downloads
Database stats
Contact us
Help
Update Log
FAQ
Links
How to cite
scaffold1659-EXSNAP2012.4
(
Pristionchus exspectatus
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
scaffold1659-EXSNAP2012.4
T191006_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
FOXI1
M03026_2.00
Homo sapiens
GTAAACA
TGTTTAC
SELEX
Jolma et al.(2013)
FOXI1_1
0.691
0.452
FOXI1
M03027_2.00
Homo sapiens
RTGTKTACGGTAAACAA
TTGTTTACCGTAMACAY
SELEX
Jolma et al.(2013)
FOXI1_2
0.691
0.452
FOXI1
M04827_2.00
Homo sapiens
NNNNNRTMAACAN
NTGTTKAYNNNNN
SELEX
Yin et al.(2017)
FOXI1_eDBD_HT-SELEX
0.691
0.452
FOXI1
M04829_2.00
Homo sapiens
AAYGTAAACAMW
WKTGTTTACRTT
SELEX
Yin et al.(2017)
FOXI1_FL_HT-SELEX
0.691
0.452
FOXI1
M09095_2.00
Homo sapiens
RRCCAATCAVAD
HTBTGATTGGYY
Misc
Kulakovskiy et al.(2013)
FOXI1_HUMAN.H11MO.0.B
0.691
0.452
FOXI1
M10556_2.00
Homo sapiens
HAWAYAAAYAHVH
DBDTRTTTRTWTD
Transfac
Matys et al.(2006)
V$HFH3_01
0.691
0.452
FOXI1
M04828_2.00
Homo sapiens
NWWVHRTAAACAH
DTGTTTAYDBWWN
SELEX
Yin et al.(2017)
FOXI1_eDBD_Methyl-HT-SELEX
0.691
0.452
FOXI1
M04830_2.00
Homo sapiens
AAYRTAAACAAW
WTTGTTTAYRTT
SELEX
Yin et al.(2017)
FOXI1_FL_Methyl-HT-SELEX
0.691
0.452
Foxi1
M09109_2.00
Mus musculus
RRCCAATCAVAD
HTBTGATTGGYY
Misc
Kulakovskiy et al.(2013)
FOXI1_MOUSE.H11MO.0.B
0.691
0.440
FOXK2
M08118_2.00
Homo sapiens
NNRTAAACANN
NNTGTTTAYNN
ChIP-seq
Mathelier et al.(2014)
MA1103.1
0.677
0.476
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
scaffold1659-EXSNAP2012.4
Forkhead
31
120
KPNLSYSQLIREAIENSPDKKCTLSSIYEYIATKYKYYAACPTITWKNSIRHNLSLNRQFTKLDKAVNGKGSFWTLSIYTSHPSTSEKKK
Links
Other
Forkhead
family TFs
Other
Pristionchus exspectatus
TFs
253 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy