CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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snap_masked-nMf.1.1.scaf25582-processed-gene-0.1
(
Meloidogyne floridensis
)
Forkhead
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00250 (Forkhead)
IPR001766
snap_masked-nMf.1.1.scaf25582-processed-gene-0.1
T191091_2.00
WormBase:ParaSite (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
daf-16
M10574_2.00
Caenorhabditis elegans
RNHGTAAACAANHN
NDNTTGTTTACDNY
Transfac
Matys et al.(2006)
N$DAF16_01
0.795
0.857
For this family, TFs with SR scores >
0.664
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
snap_masked-nMf.1.1.scaf25582-processed-gene-0.1-mRNA-1
Forkhead
19
113
KPNPWGNESYSDLIARALNTAPEGRLKLNEIYQWFSENVPYFAGRSSQEDAQGWKNSIRHNLSLHSRFMRIQNEGAGKSSWWVINPDAKPGRNPR
Links
Other
Forkhead
family TFs
Other
Meloidogyne floridensis
TFs
27 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy