RO3G_05383 (Rhizopus oryzae)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00320 (GATA) IPR000679 RO3G_05383 T191461_2.00 Broad (2016-May-1)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GLN3
M00048_2.00 		Saccharomyces cerevisiae
NHGATAAS
STTATCDN		 PBM
Badis et al.(2008)
GLN3_2032 		0.818 0.714
GLN3
M01545_2.00 		Saccharomyces cerevisiae
HGATARN
NYTATCD		 PBM
Zhu et al.(2009)
Gln3 		0.818 0.714
GLN3
M07477_2.00 		Saccharomyces cerevisiae
GATWR
YWATC		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0307.1 		0.818 0.714
GLN3
M08559_2.00 		Saccharomyces cerevisiae
GATWR
YWATC		 Misc
DeBoer et al.(2011)
YER040W_539 		0.818 0.714
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
RO3T_05382 GATA 130 164

Links

Other GATA family TFs
Other Rhizopus oryzae TFs

11 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
YALI0_F17886g Yarrowia lipolytica YALI0_F17886g I 0.836
RO3G_00657 Rhizopus oryzae RO3G_00657 I 0.831
LALA0_S01e01838g Lachancea lanzarotensis LALA0_S01e01838g I 0.820
6025_YER040W Saccharomyces mikatae 6025_YER040W I 0.818
6181_YER040W Saccharomyces paradoxus 6181_YER040W I 0.818
6302_YER040W Saccharomyces bayanus 6302_YER040W I 0.818
GLN3 Saccharomyces cerevisiae YER040W D 0.818
SU7_0865 Saccharomyces arboricola SU7_0865 I 0.818
CAGL0C02277g Candida glabrata CAGL0C02277g I 0.818
AMAG_19058 Allomyces macrogynus AMAG_19058 I 0.811
AMAG_16339 Allomyces macrogynus AMAG_16339 I 0.811