CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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SPPG_06164
(
Spizellomyces punctatus
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00320 (GATA)
IPR000679
SPPG_06164
T191512_2.00
Broad (2016-May-1)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
gtaE
M02006_2.00
Dictyostelium discoideum
NAGATBN
NVATCTN
PBM
Weirauch et al.(2014)
pTH5534
0.838
0.694
gtaG
M02007_2.00
Dictyostelium discoideum
NDNBAGATBN
NVATCTVNHN
PBM
Weirauch et al.(2014)
pTH5531
0.804
0.722
wc-2
M02016_2.00
Neurospora crassa
NNHGATNNN
NNNATCDNN
PBM
Weirauch et al.(2014)
pTH8611
0.802
0.750
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
SPPG_06164T0
GATA
345
380
CRQCGTTQSPEWRKGPSGPKTLCNACGLAFSKKQRK
Links
Other
GATA
family TFs
Other
Spizellomyces punctatus
TFs
46 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy