AMTR_s00147p00053080 (Amborella trichopoda)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 AMTR_s00147p00053080 T191685_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ERN04353 GATA 106 141

Links

Other GATA family TFs
Other Amborella trichopoda TFs

106 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action
29889.m003248 Ricinus communis 29889.m003248 I 0.811
30128.m008883 Ricinus communis 30128.m008883 N 0.825
AMTR_s00025p00250380 Amborella trichopoda AMTR_s00025p00250380 N 0.809
BGIOSGA000005 Oryza indica BGIOSGA000005 I 0.842
BGIOSGA013867 Oryza indica BGIOSGA013867 I 0.815
BGIOSGA013869 Oryza indica BGIOSGA013869 I 0.815
Bo00847s050 Brassica oleracea Bo00847s050 I 0.808
Bostr.15774s0060 Boechera stricta Bostr.15774s0060 I 0.808
Bra020650 Brassica rapa Bra020650 I 0.834
BRADI1G03020 Brachypodium distachyon BRADI1G03020 I 0.815
BRADI2G62660 Brachypodium distachyon BRADI2G62660 I 0.842
Carubv10027332m.g Capsella rubella Carubv10027332m.g I 0.808
cassava15577.m1 Manihot esculenta cassava15577.m1 I 0.826
cassava15588.m1 Manihot esculenta cassava15588.m1 I 0.826
cassava37139.valid.m1 Manihot esculenta cassava37139.valid.m1 I 0.811
cassava43030.valid.m1 Manihot esculenta cassava43030.valid.m1 I 0.808
Ca_02992 Cicer arietinum Ca_02992 I 0.807
Ciclev10003698m.g Citrus clementina Ciclev10003698m.g I 0.811
Ciclev10006161m.g Citrus clementina Ciclev10006161m.g I 0.812
Ciclev10022856m.g Citrus clementina Ciclev10022856m.g I 0.825
Cla005266 Citrullus lanatus Cla005266 N 0.828
Cla009422 Citrullus lanatus Cla009422 I 0.812
Cla022104 Citrullus lanatus Cla022104 I 0.808
CME102C Cyanidioschyzon merolae CME102C N 0.816
Cucsa.069460 Cucumis sativus Cucsa.069460 I 0.812
Cucsa.252730 Cucumis sativus Cucsa.252730 I 0.808
Eucgr.A00193 Eucalyptus grandis Eucgr.A00193 I 0.808
Eucgr.H04023 Eucalyptus grandis Eucgr.H04023 I 0.812
evm.TU.supercontig_151.51 Carica papaya evm.TU.supercontig_151.51 I 0.826
evm.TU.supercontig_48.133 Carica papaya evm.TU.supercontig_48.133 I 0.826
evm.TU.supercontig_9.102 Carica papaya evm.TU.supercontig_9.102 I 0.808
GATA16 Arabidopsis lyrata scaffold_801309.1 I 0.808
gene05175-v1.0-hybrid Fragaria vesca gene05175-v1.0-hybrid I 0.808
GLYMA07G37190 Glycine max GLYMA07G37190 I 0.811
GLYMA14G10830 Glycine max GLYMA14G10830 N 0.811
GLYMA17G03410 Glycine max GLYMA17G03410 I 0.811
Gorai.005G065300 Gossypium raimondii Gorai.005G065300 I 0.808
Gorai.007G125000 Gossypium raimondii Gorai.007G125000 I 0.825
Gorai.008G142200 Gossypium raimondii Gorai.008G142200 I 0.811
Gorai.013G127900 Gossypium raimondii Gorai.013G127900 I 0.826
Gorai.013G206400 Gossypium raimondii Gorai.013G206400 N 0.827
GRMZM2G138967 Zea mays GRMZM2G138967 N 0.811
GSMUA_Achr1G14780_001 Musa acuminata GSMUA_Achr1G14780_001 N 0.814
GSMUA_Achr7G03800_001 Musa acuminata GSMUA_Achr7G03800_001 N 0.809
GSMUA_Achr8G33850_001 Musa acuminata GSMUA_Achr8G33850_001 N 0.815
LjSGA_011217.1 Lotus japonicus LjSGA_011217.1 I 0.807
LPERR03G33900 Leersia perrieri LPERR03G33900 I 0.815
LPERR04G11580 Leersia perrieri LPERR04G11580 I 0.842
Lus10016849.g Linum usitatissimum Lus10016849.g I 0.808
Lus10020684.g Linum usitatissimum Lus10020684.g N 0.848
Lus10029863.g Linum usitatissimum Lus10029863.g N 0.834
Lus10031464.g Linum usitatissimum Lus10031464.g I 0.820
Lus10037721.g Linum usitatissimum Lus10037721.g I 0.808
MDP0000309902 Malus domestica MDP0000309902 I 0.820
mgf003937m Mimulus guttatus mgf003937m I 0.808
mgf011737m Mimulus guttatus mgf011737m N 0.814
MLOC_54886 Hordeum vulgare MLOC_54886 I 0.842
MTR_4g121110 Medicago truncatula MTR_4g121110 I 0.807
OB01G55040 Oryza brachyantha OB01G55040 I 0.842
OBART01G45830 Oryza barthii OBART01G45830 I 0.842
OBART03G39750 Oryza barthii OBART03G39750 I 0.815
OGLUM01G50190 Oryza glumaepatula OGLUM01G50190 I 0.842
OGLUM03G39650 Oryza glumaepatula OGLUM03G39650 I 0.815
OLONG_011157 Oryza longistaminata OLONG_011157 I 0.842
OLONG_023900 Oryza longistaminata OLONG_023900 I 0.815
OMERI03G36600 Oryza meridionalis OMERI03G36600 I 0.815
ONIVA01G52080 Oryza nivara ONIVA01G52080 I 0.842
ONIVA03G41600 Oryza nivara ONIVA03G41600 I 0.815
OPUNC03G36900 Oryza punctata OPUNC03G36900 I 0.815
OPUNC03G36910 Oryza punctata OPUNC03G36910 I 0.815
orange1.1g030971m.g Citrus sinensis orange1.1g030971m.g I 0.811
orange1.1g032112m.g Citrus sinensis orange1.1g032112m.g I 0.812
orange1.1g033001m.g Citrus sinensis orange1.1g033001m.g I 0.825
ORGLA01G0395900 Oryza glaberrima ORGLA01G0395900 I 0.842
ORUFI01G49320 Oryza rufipogon ORUFI01G49320 I 0.842
ORUFI03G41540 Oryza rufipogon ORUFI03G41540 I 0.815
OS01G0976800 Oryza sativa OS01G0976800 I 0.842
OS03G0831200 Oryza sativa OS03G0831200 I 0.815
Pavir.Ab00108 Panicum virgatum Pavir.Ab00108 N 0.811
Pavir.Eb04066 Panicum virgatum Pavir.Eb04066 I 0.842
PGSC0003DMG400004624 Solanum tuberosum PGSC0003DMG400004624 I 0.812
PK18820.1 Cannabis sativa PK18820.1 I 0.812
PK21934.1 Cannabis sativa PK21934.1 I 0.825
Pm003128 Prunus mume Pm003128 I 0.838
Pm008287 Prunus mume Pm008287 I 0.808
POPTR_0005s02040 Populus trichocarpa POPTR_0005s02040 I 0.826
POPTR_0008s22950 Populus trichocarpa POPTR_0008s22950 I 0.807
POPTR_0010s00360 Populus trichocarpa POPTR_0010s00360 I 0.807
PRUPE_ppa013171mg Prunus persica PRUPE_ppa013171mg I 0.808
PRUPE_ppa015310mg Prunus persica PRUPE_ppa015310mg I 0.838
SapurV1A.0107s0060 Salix purpurea SapurV1A.0107s0060 I 0.826
SapurV1A.0186s0560 Salix purpurea SapurV1A.0186s0560 I 0.826
SapurV1A.0739s0060 Salix purpurea SapurV1A.0739s0060 I 0.807
SapurV1A.2413s0010 Salix purpurea SapurV1A.2413s0010 I 0.807
Sb03g047520 Sorghum bicolor Sb03g047520 I 0.842
Si002983m.g Setaria italica Si002983m.g I 0.842
Solyc12g099370.1 Solanum lycopersicum Solyc12g099370.1 I 0.812
TCM_004753 Theobroma cacao TCM_004753 I 0.811
TCM_021303 Theobroma cacao TCM_021303 I 0.808
TCM_026732 Theobroma cacao TCM_026732 I 0.826
Thhalv10005103m.g Eutrema salsugineum Thhalv10005103m.g I 0.808
TRAES3BF026000060CFD_g Triticum aestivum TRAES3BF026000060CFD_g I 0.842
Traes_3AL_6DE434492 Triticum aestivum Traes_3AL_6DE434492 I 0.842
TRIUR3_03165 Triticum urartu TRIUR3_03165 I 0.842
VIT_05s0077g01450 Vitis vinifera VIT_05s0077g01450 I 0.812
VIT_14s0060g01520 Vitis vinifera VIT_14s0060g01520 I 0.853