CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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BGIOSGA034369
(
Oryza indica
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
BGIOSGA034369
T191833_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
BGIOSGA034369-PA
GATA
194
229
CSHCGTSETPQWRMGPDGPGTLCNACGIRSKMDRLL
Links
Other
GATA
family TFs
Other
Oryza indica
TFs
15 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
BGIOSGA034366
Oryza indica
BGIOSGA034366
N
0.867
OMERI11G04470
Oryza meridionalis
OMERI11G04470
N
0.867
ONIVA11G05790
Oryza nivara
ONIVA11G05790
N
0.867
OGLUM11G05230
Oryza glumaepatula
OGLUM11G05230
N
0.867
OBART11G05410
Oryza barthii
OBART11G05410
N
0.867
OS11G0187200
Oryza sativa
OS11G0187200
N
0.867
ORUFI11G05240
Oryza rufipogon
ORUFI11G05240
N
0.867
ORGLA11G0198500
Oryza glaberrima
ORGLA11G0198500
N
0.867
OPUNC11G05200
Oryza punctata
OPUNC11G05200
N
0.867
ORGLA03G0022100
Oryza glaberrima
ORGLA03G0022100
N
0.833
OMERI03G02300
Oryza meridionalis
OMERI03G02300
N
0.833
OGLUM03G02370
Oryza glumaepatula
OGLUM03G02370
N
0.833
OBART03G02440
Oryza barthii
OBART03G02440
N
0.833
LPERR03G02230
Leersia perrieri
LPERR03G02230
N
0.817
LPERR11G04840
Leersia perrieri
LPERR11G04840
N
0.811