BRADI3G03800 (Brachypodium distachyon)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 BRADI3G03800 T192008_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
GATA24
M01941_2.00 		Arabidopsis thaliana
HGATBNN
NNVATCD		 PBM
Weirauch et al.(2014)
pTH7661 		0.834 0.806
OS06G0698900
M02015_2.00 		Oryza sativa
NNNNAHBNN
NNVDTNNNN		 PBM
Weirauch et al.(2014)
pTH8641 		0.829 0.778
GATA28
M01996_2.00 		Arabidopsis thaliana
NNGATNN
NNATCNN		 PBM
Weirauch et al.(2014)
pTH7505 		0.818 0.750
GATA28
M06883_2.00 		Arabidopsis thaliana
GATGATGATGATGATGATG
CATCATCATCATCATCATC		 Dap-seq
OMalley et al.(2016)
ZML2_col_a 		0.818 0.750
For this family, TFs with SR scores > 0.802 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G03800.1 GATA 265 302

Links

Other GATA family TFs
Other Brachypodium distachyon TFs

101 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LPERR06G21800 Leersia perrieri LPERR06G21800 I 0.834
MLOC_3107 Hordeum vulgare MLOC_3107 I 0.834
LPERR02G03330 Leersia perrieri LPERR02G03330 I 0.834
GATA24 Arabidopsis thaliana AT3G21175 D 0.834
Traes_6AS_4106E8E28 Triticum aestivum Traes_6AS_4106E8E28 I 0.834
GSMUA_Achr7G08720_001 Musa acuminata GSMUA_Achr7G08720_001 I 0.834
OB06G33840 Oryza brachyantha OB06G33840 I 0.834
OBART02G03780 Oryza barthii OBART02G03780 I 0.834
ONIVA02G03810 Oryza nivara ONIVA02G03810 I 0.834
ORGLA02G0035000 Oryza glaberrima ORGLA02G0035000 I 0.834
OMERI02G04610 Oryza meridionalis OMERI02G04610 I 0.834
ORUFI02G03830 Oryza rufipogon ORUFI02G03830 I 0.834
GATA17 Oryza sativa OS02G0148500 I 0.834
OGLUM02G03560 Oryza glumaepatula OGLUM02G03560 I 0.834
GSMUA_Achr10G06260_001 Musa acuminata GSMUA_Achr10G06260_001 I 0.834
Si006750m.g Setaria italica Si006750m.g I 0.834
Pavir.Da00166 Panicum virgatum Pavir.Da00166 I 0.834
BGIOSGA007539 Oryza indica BGIOSGA007539 I 0.834
Traes_6BS_AB5909D02 Triticum aestivum Traes_6BS_AB5909D02 I 0.834
Cucsa.359570 Cucumis sativus Cucsa.359570 I 0.834
mgf016112m Mimulus guttatus mgf016112m I 0.834
Pavir.Db00254 Panicum virgatum Pavir.Db00254 I 0.834
PDK_20s1340921g001 Phoenix dactylifera PDK_20s1340921g001 I 0.834
PDK_20s1879741g001 Phoenix dactylifera PDK_20s1879741g001 I 0.834
Traes_6DS_6268D31AE Triticum aestivum Traes_6DS_6268D31AE I 0.834
TRIUR3_32095 Triticum urartu TRIUR3_32095 I 0.834
ZML1 Arabidopsis lyrata fgenesh2_kg.3__2338__AT3G21175.1 I 0.834
F775_08559 Aegilops tauschii F775_08559 I 0.834
Aquca_018_00034 Aquilegia coerulea Aquca_018_00034 I 0.834
LPERR11G14110 Leersia perrieri LPERR11G14110 I 0.832
Cla015736 Citrullus lanatus Cla015736 I 0.832
ORGLA06G0219100 Oryza glaberrima ORGLA06G0219100 I 0.829
OS06G0698900 Oryza sativa OS06G0698900 D 0.829
OPUNC06G23830 Oryza punctata OPUNC06G23830 I 0.829
PRUPE_ppa009709mg Prunus persica PRUPE_ppa009709mg I 0.829
Pm013048 Prunus mume Pm013048 I 0.829
ORUFI06G28170 Oryza rufipogon ORUFI06G28170 I 0.829
Sb10g028750 Sorghum bicolor Sb10g028750 I 0.829
GRMZM2G058479 Zea mays GRMZM2G058479 I 0.829
OPUNC02G02970 Oryza punctata OPUNC02G02970 I 0.829
GSMUA_Achr3G05620_001 Musa acuminata GSMUA_Achr3G05620_001 I 0.829
GSMUA_Achr2G04520_001 Musa acuminata GSMUA_Achr2G04520_001 I 0.829
GRMZM2G080509 Zea mays GRMZM2G080509 I 0.829
OB02G13220 Oryza brachyantha OB02G13220 I 0.829
BRADI1G33980 Brachypodium distachyon BRADI1G33980 I 0.829
OLONG_015069 Oryza longistaminata OLONG_015069 I 0.829
ONIVA06G28780 Oryza nivara ONIVA06G28780 I 0.829
OGLUM06G27650 Oryza glumaepatula OGLUM06G27650 I 0.829
OBART06G26250 Oryza barthii OBART06G26250 I 0.829
BGIOSGA020596 Oryza indica BGIOSGA020596 I 0.828
OMERI06G26410 Oryza meridionalis OMERI06G26410 I 0.828
Cagra.1757s0004 Capsella grandiflora Cagra.1757s0004 I 0.823
Cagra.2346s0015 Capsella grandiflora Cagra.2346s0015 I 0.823
Aquca_007_00522 Aquilegia coerulea Aquca_007_00522 I 0.823
cassava6876.valid.m1 Manihot esculenta cassava6876.valid.m1 I 0.823
Cucsa.218190 Cucumis sativus Cucsa.218190 I 0.823
Bra023900 Brassica rapa Bra023900 I 0.823
Aquca_010_00250 Aquilegia coerulea Aquca_010_00250 I 0.823
Bo5g103560 Brassica oleracea Bo5g103560 I 0.823
Ciclev10027306m.g Citrus clementina Ciclev10027306m.g I 0.823
Bo1g108240 Brassica oleracea Bo1g108240 I 0.823
SapurV1A.0036s1170 Salix purpurea SapurV1A.0036s1170 I 0.823
SapurV1A.0187s0150 Salix purpurea SapurV1A.0187s0150 I 0.823
Thhalv10020970m.g Eutrema salsugineum Thhalv10020970m.g I 0.823
orange1.1g022728m.g Citrus sinensis orange1.1g022728m.g I 0.823
Gorai.008G017800 Gossypium raimondii Gorai.008G017800 I 0.823
Carubv10016131m.g Capsella rubella Carubv10016131m.g I 0.823
cassava12169.valid.m1 Manihot esculenta cassava12169.valid.m1 I 0.823
Eucgr.J03166 Eucalyptus grandis Eucgr.J03166 I 0.823
Carubv10009866m.g Capsella rubella Carubv10009866m.g I 0.823
Pm022163 Prunus mume Pm022163 I 0.823
GSMUA_Achr9G13870_001 Musa acuminata GSMUA_Achr9G13870_001 I 0.823
GLYMA08G23720 Glycine max GLYMA08G23720 I 0.823
29838.m001724 Ricinus communis 29838.m001724 I 0.823
TCM_027858 Theobroma cacao TCM_027858 I 0.823
TCM_007360 Theobroma cacao TCM_007360 I 0.823
VIT_09s0054g00440 Vitis vinifera VIT_09s0054g00440 I 0.823
PRUPE_ppa009401mg Prunus persica PRUPE_ppa009401mg I 0.823
Bra031258 Brassica rapa Bra031258 I 0.823
Ca_17522 Cicer arietinum Ca_17522 I 0.823
POPTR_0007s03130 Populus trichocarpa POPTR_0007s03130 I 0.823
POPTR_0010s25810 Populus trichocarpa POPTR_0010s25810 I 0.823
evm.TU.supercontig_155.28 Carica papaya evm.TU.supercontig_155.28 I 0.821
Cla013127 Citrullus lanatus Cla013127 I 0.821
ZML2 Arabidopsis lyrata scaffold_104929.1 I 0.818
Bo3g181450 Brassica oleracea Bo3g181450 I 0.818
MLOC_17061 Hordeum vulgare MLOC_17061 I 0.818
Thhalv10011695m.g Eutrema salsugineum Thhalv10011695m.g I 0.818
GATA28 Arabidopsis thaliana AT1G51600 D 0.818
Traes_7AL_EA6F4FFDE Triticum aestivum Traes_7AL_EA6F4FFDE I 0.818
e_gw1.226.30.1 Physcomitrella patens e_gw1.226.30.1 I 0.818
gw1.68.123.1 Physcomitrella patens gw1.68.123.1 I 0.818
fgenesh2_pm.scaffold_111000001 Physcomitrella patens fgenesh2_pm.scaffold_111000001 I 0.818
SELMODRAFT_177195 Selaginella moellendorffii SELMODRAFT_177195 I 0.818
TRIUR3_11107 Triticum urartu TRIUR3_11107 I 0.818
SELMODRAFT_423855 Selaginella moellendorffii SELMODRAFT_423855 I 0.818
Traes_7DL_A5ECEDA95 Triticum aestivum Traes_7DL_A5ECEDA95 I 0.818
Bostr.26675s0048 Boechera stricta Bostr.26675s0048 I 0.818
fgenesh1_pm.scaffold_69000012 Physcomitrella patens fgenesh1_pm.scaffold_69000012 I 0.818
Bra014292 Brassica rapa Bra014292 I 0.817
POPTR_0017s06980 Populus trichocarpa POPTR_0017s06980 I 0.817