CBG07341 (Caenorhabditis briggsae)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 CBG07341 T192126_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG07341
M01230_2.00		 Caenorhabditis briggsae
HGATANNN
NNNTATCD		 PBM
Lambert et al.(2019)
pTH11455		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
elt-3
M08128_2.00 		Caenorhabditis elegans
TGATAAVA
TBTTATCA		 ChIP-seq
Mathelier et al.(2014)
MA0542.1 		0.867 1.000
elt-3
M09557_2.00 		Caenorhabditis elegans
DDTGATAASA
TSTTATCAHH		 Misc
Heinz et al.(2010)
cElegans-L1-ELT3_modEncode 		0.867 1.000
For this family, TFs with SR scores > 0.802 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01230_2.00 GATA 51 85

DNA Binding Domains

Protein ID Domain From To Sequence
CBG07341 GATA 229 263

Links

Other GATA family TFs
Other Caenorhabditis briggsae TFs

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24 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action