CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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CBG08810
(
Caenorhabditis briggsae
)
GATA
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00320 (GATA)
IPR000679
CBG08810
T192127_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
GATAe
M03761_2.00
Drosophila melanogaster
VHGATAAS
STTATCDB
SELEX
Nitta et al.(2015)
GATAe_1
0.807
0.543
GATAe
M03762_2.00
Drosophila melanogaster
HGATAACNNNGTTATCD
HGATAACNNNGTTATCD
SELEX
Nitta et al.(2015)
GATAe_2
0.807
0.543
GATAe
M03763_2.00
Drosophila melanogaster
HGATAAGNNNCTTATCD
HGATAAGNNNCTTATCD
SELEX
Nitta et al.(2015)
GATAe_3
0.807
0.543
GATAe
M06208_2.00
Drosophila melanogaster
WGATAAG
CTTATCW
B1H
Zhu et al.(2011)
GATAe_SANGER_5_FBgn0038391
0.807
0.543
For this family, TFs with SR scores >
0.802
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
CBG08810
GATA
133
167
CANCSTTETSLWRKNEEGDLECNACNLYFRLNKVK
Links
Other
GATA
family TFs
Other
Caenorhabditis briggsae
TFs
170 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
Invalid Input OrderBy