CBG13549 (Caenorhabditis briggsae)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 CBG13549 T192133_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CBG13549
M01231_2.00		 Caenorhabditis briggsae
NTGATAAN
NTTATCAN		 PBM
Lambert et al.(2019)
pTH11492		 (Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
elt-6
M00666_2.00 		Caenorhabditis elegans
NTGATAAN
NTTATCAN		 PBM
Narasimhan et al.(2015)
pTH10707 		0.851 0.943
For this family, TFs with SR scores > 0.802 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01231_2.00 GATA 51 85

DNA Binding Domains

Protein ID Domain From To Sequence
CBG13549 GATA 288 322

Links

Other GATA family TFs
Other Caenorhabditis briggsae TFs

51 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANCCAN_00554 Ancylostoma caninum ANCCAN_00554 I 0.867
ACAC_0000752101 Angiostrongylus cantonensis ACAC_0000752101 I 0.867
ANCCEY_12899 Ancylostoma ceylanicum ANCCEY_12899 I 0.867
DICVIV_08848 Dictyocaulus viviparus DICVIV_08848 I 0.867
NECAME_05031 Necator americanus NECAME_05031 I 0.867
Hba_15007 Heterorhabditis bacteriophora Hba_15007 I 0.867
OESDEN_09249 Oesophagostomum dentatum OESDEN_09249 I 0.867
ACOC_0000580401 Angiostrongylus costaricensis ACOC_0000580401 I 0.867
CRE31380 Caenorhabditis remanei CRE31380 I 0.867
TCLT_0000574501 Thelazia callipaeda TCLT_0000574501 I 0.856
GPLIN_000855200 Globodera pallida GPLIN_000855200 I 0.856
nOo.2.0.1.g08948 Onchocerca ochengi nOo.2.0.1.g08948 I 0.856
scaffold1033-EXSNAP2012.2 Pristionchus exspectatus scaffold1033-EXSNAP2012.2 I 0.856
WUBG_10387 Wuchereria bancrofti WUBG_10387 I 0.856
nDi.2.2.2.g02293 Dirofilaria immitis nDi.2.2.2.g02293 I 0.856
Bm4254 Brugia malayi Bm4254 I 0.856
nLs.2.1.2.g04395 Litomosoides sigmodontis nLs.2.1.2.g04395 I 0.856
ASU_04064 Ascaris suum ASU_04064 I 0.856
ASIM_0001333801 Anisakis simplex ASIM_0001333801 I 0.856
nAv.1.0.1.g03924 Acanthocheilonema viteae nAv.1.0.1.g03924 I 0.856
WBGene00241875 Onchocerca volvulus WBGene00241875 I 0.856
OFLC_0000492601 Onchocerca flexuosa OFLC_0000492601 I 0.856
LOAG_07460 Loa loa LOAG_07460 I 0.856
ALUE_0001545901 Ascaris lumbricoides ALUE_0001545901 I 0.856
scaffold1024-EXSNAP2012.4 Pristionchus exspectatus scaffold1024-EXSNAP2012.4 I 0.856
CJA11149 Caenorhabditis japonica CJA11149 I 0.856
BXY_0772600 Bursaphelenchus xylophilus BXY_0772600 I 0.855
SBAD_0000818101 Soboliphyme baturini SBAD_0000818101 I 0.855
nRc.2.0.1.g15145 Romanomermis culicivorax nRc.2.0.1.g15145 I 0.855
HCOI01886300 Haemonchus contortus HCOI01886300 I 0.853
EVEC_0001284001 Enterobius vermicularis EVEC_0001284001 I 0.851
elt-6 Caenorhabditis elegans WBGene00001253 D 0.851
CRE31381 Caenorhabditis remanei CRE31381 I 0.850
CJA18864 Caenorhabditis japonica CJA18864 I 0.850
CBN10937 Caenorhabditis brenneri CBN10937 I 0.850
SMUV_0001093901 Syphacia muris SMUV_0001093901 I 0.850
CBG13548 Caenorhabditis briggsae CBG13548 I 0.850
SVE_0995400 Strongyloides venezuelensis SVE_0995400 I 0.850
SSTP_0001171300 Strongyloides stercoralis SSTP_0001171300 I 0.850
SPAL_0001590300 Strongyloides papillosus SPAL_0001590300 I 0.850
PTRK_0001379700 Parastrongyloides trichosuri PTRK_0001379700 I 0.850
egl-18 Caenorhabditis elegans WBGene00001186 I 0.850
NBR_0001940901 Nippostrongylus brasiliensis NBR_0001940901 I 0.842
L893_g28710 Steinernema glaseri L893_g28710 I 0.842
maker-nMf.1.1.scaf08707-augustus-gene-0.3 Meloidogyne floridensis maker-nMf.1.1.scaf08707-augustus-gene-0.3 I 0.842
L892_g6412 Steinernema scapterisci L892_g6412 I 0.842
L889_g31947 Steinernema feltiae L889_g31947 I 0.842
L898_g8209 Steinernema monticolum L898_g8209 I 0.842
Minc08374 Meloidogyne incognita Minc08374 I 0.842
L596_g25881 Steinernema carpocapsae L596_g25881 I 0.842
RSKR_0000556500 Rhabditophanes kr3021 RSKR_0000556500 I 0.836