CBG13549 (Caenorhabditis briggsae)
GATA

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00320 (GATA) IPR000679 CBG13549 T192133_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
CBG13549
M01231_2.00
Caenorhabditis briggsae
NTGATAAN

NTTATCAN
PBM
Lambert et al.(2019)
pTH11492
(Direct) (Direct)

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score
DBD
Identity
elt-6
M00666_2.00
Caenorhabditis elegans
NTGATAAN

NTTATCAN
PBM
Narasimhan et al.(2015)
pTH10707
0.851 0.943
For this family, TFs with SR scores > 0.802 will likely have a similar motif

Experimental Constructs

Motif ID Domain From To Sequence
M01231_2.00 GATA 51 85

DNA Binding Domains

Protein ID Domain From To Sequence
CBG13549 GATA 288 322

Links

Other GATA family TFs
Other Caenorhabditis briggsae TFs

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51 Related TFs

Name Species Gene ID Motif Evidence SR
Score
Action